Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21672963

Identifier: 21672963

GI number: 21672963

Start: 116044

End: 116658

Strand: Reverse

Name: 21672963

Synonym: CT0122

Alternate gene names: NA

Gene position: 116658-116044 (Counterclockwise)

Preceding gene: 21672964

Following gene: 21672962

Centisome position: 5.41

GC content: 54.8

Gene sequence:

>615_bases
ATGCTGGAAATGAAAGCCACGGGCAAGAGCAAGGGTCAATGGATGTTTTACCGGAACTTCGATGACACGGTTGACTATCT
CTCCGACCATACGAGAATTCTCTCCTACAACCCATTCTGCCACAAAGTCGAGCCGCTCGACCGGGATGAAGCCTACCGCT
GGCATTTCCGGGTCACCGATCCCCAGAACAACCCGTTCGACGTGATCTTCAACATCCAGCAGGAGACCGAAATCCTCGTC
GACCTTCCGGATGAGGTCGCCTCGATGGACCCCGAAGAGATGAGCGACGAGATGATCCGCCAGTTCACGGTGGGCCGGAA
GATTACCTGGCGGCCGTTGGCCCAGGACAAGACATTCACCATGCCTGAAAAGTACCTCTTCGAAGGCCAGGTCACGGCCG
ACATGCTGATCGTTCCGGTACAGCAAGAGCAGACAAGAGTTGATTTCGACCTCTGGGTCAATGTCGCGTTCCTGCTCTAT
CCGGCCTTCCGCATTGTGCCCGAGAAGGTTGTGCGCACCATGGTCAGCACCGGCATGTCACTCATCATGCAGACAGCGAC
CAATCATATGTTCCAGAAAATCTCGAAAGAGTTCGGCAAGATACGCAAGCTCTGA

Upstream 100 bases:

>100_bases
TTTTCAGAGATAACGCCGACCACCCGGCCATTTTTTTCAACCAAAGGATATGAAGATCGCTCATGTGGAGCTGATTCGCG
CATGAGCCGGAGAAGACGAT

Downstream 100 bases:

>100_bases
GAGCGCTCCGTTAACCGCCATGACCACCATCGCCGCTTGAGCAAGGACGCACAACAGATTTCCGCCCTCCGCCGGTTCTC
GGTCTCGATCATCAGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLEMKATGKSKGQWMFYRNFDDTVDYLSDHTRILSYNPFCHKVEPLDRDEAYRWHFRVTDPQNNPFDVIFNIQQETEILV
DLPDEVASMDPEEMSDEMIRQFTVGRKITWRPLAQDKTFTMPEKYLFEGQVTADMLIVPVQQEQTRVDFDLWVNVAFLLY
PAFRIVPEKVVRTMVSTGMSLIMQTATNHMFQKISKEFGKIRKL

Sequences:

>Translated_204_residues
MLEMKATGKSKGQWMFYRNFDDTVDYLSDHTRILSYNPFCHKVEPLDRDEAYRWHFRVTDPQNNPFDVIFNIQQETEILV
DLPDEVASMDPEEMSDEMIRQFTVGRKITWRPLAQDKTFTMPEKYLFEGQVTADMLIVPVQQEQTRVDFDLWVNVAFLLY
PAFRIVPEKVVRTMVSTGMSLIMQTATNHMFQKISKEFGKIRKL
>Mature_204_residues
MLEMKATGKSKGQWMFYRNFDDTVDYLSDHTRILSYNPFCHKVEPLDRDEAYRWHFRVTDPQNNPFDVIFNIQQETEILV
DLPDEVASMDPEEMSDEMIRQFTVGRKITWRPLAQDKTFTMPEKYLFEGQVTADMLIVPVQQEQTRVDFDLWVNVAFLLY
PAFRIVPEKVVRTMVSTGMSLIMQTATNHMFQKISKEFGKIRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24133; Mature: 24133

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEMKATGKSKGQWMFYRNFDDTVDYLSDHTRILSYNPFCHKVEPLDRDEAYRWHFRVTD
CCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEC
PQNNPFDVIFNIQQETEILVDLPDEVASMDPEEMSDEMIRQFTVGRKITWRPLAQDKTFT
CCCCCEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
MPEKYLFEGQVTADMLIVPVQQEQTRVDFDLWVNVAFLLYPAFRIVPEKVVRTMVSTGMS
CCHHHEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIMQTATNHMFQKISKEFGKIRKL
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEMKATGKSKGQWMFYRNFDDTVDYLSDHTRILSYNPFCHKVEPLDRDEAYRWHFRVTD
CCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEC
PQNNPFDVIFNIQQETEILVDLPDEVASMDPEEMSDEMIRQFTVGRKITWRPLAQDKTFT
CCCCCEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
MPEKYLFEGQVTADMLIVPVQQEQTRVDFDLWVNVAFLLYPAFRIVPEKVVRTMVSTGMS
CCHHHEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIMQTATNHMFQKISKEFGKIRKL
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA