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The map label for this gene is msrB [H]

Identifier: 21672944

GI number: 21672944

Start: 96786

End: 97343

Strand: Direct

Name: msrB [H]

Synonym: CT0103

Alternate gene names: 21672944

Gene position: 96786-97343 (Clockwise)

Preceding gene: 21672943

Following gene: 21672949

Centisome position: 4.49

GC content: 57.17

Gene sequence:

>558_bases
ATGAGACGAGTGACCACATTGCTGGTTATGATGCTGACCGTGTTATCCGCTTGTCAGGCCTCACCGAAAGCTTCGCCAAC
GAAACCGGGCAACGCCATGAGCAACAATCATCCGCAGAATCCCTACTACTCCCGCACCGATACTACCCGGCTTGATTTGC
CGAACGAGGTCTGGAAAAAGGTGCTCTCTCCTGAACTCTATGCCGTGGCCCGGCTTGCCGAAACCGAACGGGCTTTTACC
GGCAAATACTGGAATTACGAAGGTCTTGGGACCTACTACTGCGCGGCCTGTGGCAATACCCTGTTCCGGTCGGATGCCAA
GTTCGCCAGCACCTGTGGCTGGCCGAGCTTTTTCGAGACGGTACGTCCTGGCAGTGTCGCGTATCGTGAAGATACCTCGT
TCGGCATGGTGCGTACCGAAGTGCTTTGCGGACGTTGCGGCGCGCACCTTGGTCACGTCTTCGACGACGGTCCGCCTCCG
ACCGGCAAGCGCTTCTGCATGAACTCGATCTGCCTCGATTTTGAGCCGGATCAGCCTGAAACAGCAAAGCCGCAGTGA

Upstream 100 bases:

>100_bases
GGAGATTACGAAGGCCTGGCAGGAGTATCGCACCACAACGGAAGCTTAGCCGGAACGCTTGCGAGGGCAATGCGGTTATG
GTGGAAAAACCCTGACCGCC

Downstream 100 bases:

>100_bases
TCTTCTGCGGCTTTGCTGGACCGTTGTGCGGCATGTCAGGCACACGGTCATATCACGATATTTTTCAGTGCACCGATGAC
ATATCCACCGTCTCTTTTTT

Product: PilB-related protein

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRRVTTLLVMMLTVLSACQASPKASPTKPGNAMSNNHPQNPYYSRTDTTRLDLPNEVWKKVLSPELYAVARLAETERAFT
GKYWNYEGLGTYYCAACGNTLFRSDAKFASTCGWPSFFETVRPGSVAYREDTSFGMVRTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSICLDFEPDQPETAKPQ

Sequences:

>Translated_185_residues
MRRVTTLLVMMLTVLSACQASPKASPTKPGNAMSNNHPQNPYYSRTDTTRLDLPNEVWKKVLSPELYAVARLAETERAFT
GKYWNYEGLGTYYCAACGNTLFRSDAKFASTCGWPSFFETVRPGSVAYREDTSFGMVRTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSICLDFEPDQPETAKPQ
>Mature_185_residues
MRRVTTLLVMMLTVLSACQASPKASPTKPGNAMSNNHPQNPYYSRTDTTRLDLPNEVWKKVLSPELYAVARLAETERAFT
GKYWNYEGLGTYYCAACGNTLFRSDAKFASTCGWPSFFETVRPGSVAYREDTSFGMVRTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSICLDFEPDQPETAKPQ

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI37620216, Length=127, Percent_Identity=44.8818897637795, Blast_Score=130, Evalue=6e-31,
Organism=Homo sapiens, GI301336164, Length=127, Percent_Identity=44.8818897637795, Blast_Score=130, Evalue=6e-31,
Organism=Homo sapiens, GI301336162, Length=127, Percent_Identity=44.8818897637795, Blast_Score=130, Evalue=6e-31,
Organism=Homo sapiens, GI73089054, Length=127, Percent_Identity=44.8818897637795, Blast_Score=130, Evalue=6e-31,
Organism=Homo sapiens, GI117606353, Length=138, Percent_Identity=46.3768115942029, Blast_Score=121, Evalue=3e-28,
Organism=Homo sapiens, GI7706511, Length=107, Percent_Identity=42.0560747663551, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=48.7394957983193, Blast_Score=117, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17553450, Length=126, Percent_Identity=49.2063492063492, Blast_Score=122, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI115532676, Length=126, Percent_Identity=49.2063492063492, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6319816, Length=133, Percent_Identity=42.1052631578947, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=47.65625, Blast_Score=130, Evalue=6e-31,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=45.1851851851852, Blast_Score=127, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24645799, Length=138, Percent_Identity=42.7536231884058, Blast_Score=123, Evalue=9e-29,
Organism=Drosophila melanogaster, GI45553335, Length=138, Percent_Identity=42.7536231884058, Blast_Score=123, Evalue=9e-29,
Organism=Drosophila melanogaster, GI21356369, Length=138, Percent_Identity=42.7536231884058, Blast_Score=123, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24645804, Length=149, Percent_Identity=39.5973154362416, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24645801, Length=149, Percent_Identity=39.5973154362416, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 20584; Mature: 20584

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVTTLLVMMLTVLSACQASPKASPTKPGNAMSNNHPQNPYYSRTDTTRLDLPNEVWKK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
VLSPELYAVARLAETERAFTGKYWNYEGLGTYYCAACGNTLFRSDAKFASTCGWPSFFET
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCHHHHHH
VRPGSVAYREDTSFGMVRTEVLCGRCGAHLGHVFDDGPPPTGKRFCMNSICLDFEPDQPE
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCC
TAKPQ
CCCCC
>Mature Secondary Structure
MRRVTTLLVMMLTVLSACQASPKASPTKPGNAMSNNHPQNPYYSRTDTTRLDLPNEVWKK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
VLSPELYAVARLAETERAFTGKYWNYEGLGTYYCAACGNTLFRSDAKFASTCGWPSFFET
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCHHHHHH
VRPGSVAYREDTSFGMVRTEVLCGRCGAHLGHVFDDGPPPTGKRFCMNSICLDFEPDQPE
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCCC
TAKPQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]