| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is aroB [H]
Identifier: 21672940
GI number: 21672940
Start: 92946
End: 93938
Strand: Direct
Name: aroB [H]
Synonym: CT0099
Alternate gene names: 21672940
Gene position: 92946-93938 (Clockwise)
Preceding gene: 21672939
Following gene: 21672942
Centisome position: 4.31
GC content: 62.74
Gene sequence:
>993_bases ATGCAAGGTCGGGTTCTCGCTAATAATTGTAAAACCATGTCCAACGCAACCGAACGCATTGCCTGCATCGATGTCGGCAC CAATACGGCCCTGCTGCTGGTCGCCGATCTTGACGCTGCGGCCAGCAACATCGTGACCGTCGATCACCGCCAGACCATCG TGCGCCTCGGCCAGAACGTCGATGAATACCGGATGATCCACCCTGAAGCGCTCGACCGGCTGATTGCCTGCATGACGGAG TACCGGAATCTGTGCGATGGACTTGGCGTGCAGCGGATTCTGGCCGTCGGTACCAGCGCCCTGCGTGACGCGGCCAACCG CGATGAAGTCATCGCGGCGGTCAAGGGCGAGACCGGCATCGAAATCCGCTGCATCAGCGGAGACGAGGAGGCCGCGCTCA CCTTTTTCGGCGCGGTGGCCGGGCTGCCGGAGGTGCCGGAACCGTTCACGGTGATCGACATCGGCGGTGGCAGCACCGAA ATCATCATGGGCACAGTCGAGCAGGTTGACAGCGCGGTCAGCATAAACATCGGTTCGGTGAGAATGACCGAACGCTTTTG CGCCGCGCAGCCCCCGTCGCCGGAGGCGTTCGAGGCGGCAAAAAAGGAGATTAACCGCAAGCTCGCCAGAAGCCTGCCGC CGTTTTTCGCGGGTCGCCAGCAGGTTTTCGGCGTCGCGGGCACGCTGACCACCATTGCACAGGTGTGCCTCGGTGACCGC CATTTCGACGCGGCGAAAGTGCAGGGCTACCGGCTTGAATACGATGCGGTGCACGAGCTGCTCGACCGGCTCCGCGCGAT GAAGCTCAACGAGATCGTGGCGCTCGGCATCCCAGAAGGGCGCGCCGACGTCTTTACGATGGGCGTGCTCATCCTGCATC AGTTCATGCGGATGCTCGGCGTCGGCAGCCTGACGGTGAGCATCCAGGGCCTGCGCTACGGCGTGGCGCAGCAGGAGCTT CAGAAGCTTCTGATGCTTCGCAACCGGACCTGA
Upstream 100 bases:
>100_bases TTCAGAATCAGGGGAGCGAACTCTGCCCCGCCCCGGCTTGAAAGCCGAGGCAACATGAATGCAAGAGATTTGAAGGGCCA CGGGGCTGAAGCTCTGCTGA
Downstream 100 bases:
>100_bases AGCTCACGGCTTTCTGCACGAGAGCCAGATGAGACTGCCCGTAGCGTTTTTCGTGAAAAAGAGATAGCGCTCGCTGCTCT CCCCGATTTTGTACCGCTTG
Product: exopolyphosphatase, putative
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MQGRVLANNCKTMSNATERIACIDVGTNTALLLVADLDAAASNIVTVDHRQTIVRLGQNVDEYRMIHPEALDRLIACMTE YRNLCDGLGVQRILAVGTSALRDAANRDEVIAAVKGETGIEIRCISGDEEAALTFFGAVAGLPEVPEPFTVIDIGGGSTE IIMGTVEQVDSAVSINIGSVRMTERFCAAQPPSPEAFEAAKKEINRKLARSLPPFFAGRQQVFGVAGTLTTIAQVCLGDR HFDAAKVQGYRLEYDAVHELLDRLRAMKLNEIVALGIPEGRADVFTMGVLILHQFMRMLGVGSLTVSIQGLRYGVAQQEL QKLLMLRNRT
Sequences:
>Translated_330_residues MQGRVLANNCKTMSNATERIACIDVGTNTALLLVADLDAAASNIVTVDHRQTIVRLGQNVDEYRMIHPEALDRLIACMTE YRNLCDGLGVQRILAVGTSALRDAANRDEVIAAVKGETGIEIRCISGDEEAALTFFGAVAGLPEVPEPFTVIDIGGGSTE IIMGTVEQVDSAVSINIGSVRMTERFCAAQPPSPEAFEAAKKEINRKLARSLPPFFAGRQQVFGVAGTLTTIAQVCLGDR HFDAAKVQGYRLEYDAVHELLDRLRAMKLNEIVALGIPEGRADVFTMGVLILHQFMRMLGVGSLTVSIQGLRYGVAQQEL QKLLMLRNRT >Mature_330_residues MQGRVLANNCKTMSNATERIACIDVGTNTALLLVADLDAAASNIVTVDHRQTIVRLGQNVDEYRMIHPEALDRLIACMTE YRNLCDGLGVQRILAVGTSALRDAANRDEVIAAVKGETGIEIRCISGDEEAALTFFGAVAGLPEVPEPFTVIDIGGGSTE IIMGTVEQVDSAVSINIGSVRMTERFCAAQPPSPEAFEAAKKEINRKLARSLPPFFAGRQQVFGVAGTLTTIAQVCLGDR HFDAAKVQGYRLEYDAVHELLDRLRAMKLNEIVALGIPEGRADVFTMGVLILHQFMRMLGVGSLTVSIQGLRYGVAQQEL QKLLMLRNRT
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=309, Percent_Identity=29.126213592233, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788848, Length=304, Percent_Identity=27.9605263157895, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 35800; Mature: 35800
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGRVLANNCKTMSNATERIACIDVGTNTALLLVADLDAAASNIVTVDHRQTIVRLGQNV CCCCEECCCCHHHHCHHHEEEEEEECCCCEEEEEEECCCCCCCCEEECHHHHHHHHCCCC DEYRMIHPEALDRLIACMTEYRNLCDGLGVQRILAVGTSALRDAANRDEVIAAVKGETGI HHHHEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE EIRCISGDEEAALTFFGAVAGLPEVPEPFTVIDIGGGSTEIIMGTVEQVDSAVSINIGSV EEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCEEEEEECCE RMTERFCAAQPPSPEAFEAAKKEINRKLARSLPPFFAGRQQVFGVAGTLTTIAQVCLGDR EHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCC HFDAAKVQGYRLEYDAVHELLDRLRAMKLNEIVALGIPEGRADVFTMGVLILHQFMRMLG CCCHHHCCCEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHC VGSLTVSIQGLRYGVAQQELQKLLMLRNRT CCCEEEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQGRVLANNCKTMSNATERIACIDVGTNTALLLVADLDAAASNIVTVDHRQTIVRLGQNV CCCCEECCCCHHHHCHHHEEEEEEECCCCEEEEEEECCCCCCCCEEECHHHHHHHHCCCC DEYRMIHPEALDRLIACMTEYRNLCDGLGVQRILAVGTSALRDAANRDEVIAAVKGETGI HHHHEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE EIRCISGDEEAALTFFGAVAGLPEVPEPFTVIDIGGGSTEIIMGTVEQVDSAVSINIGSV EEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCEEEEEECCE RMTERFCAAQPPSPEAFEAAKKEINRKLARSLPPFFAGRQQVFGVAGTLTTIAQVCLGDR EHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCC HFDAAKVQGYRLEYDAVHELLDRLRAMKLNEIVALGIPEGRADVFTMGVLILHQFMRMLG CCCHHHCCCEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHC VGSLTVSIQGLRYGVAQQELQKLLMLRNRT CCCEEEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]