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The map label for this gene is spr [H]

Identifier: 21672938

GI number: 21672938

Start: 91182

End: 91829

Strand: Direct

Name: spr [H]

Synonym: CT0097

Alternate gene names: 21672938

Gene position: 91182-91829 (Clockwise)

Preceding gene: 21672932

Following gene: 21672939

Centisome position: 4.23

GC content: 56.02

Gene sequence:

>648_bases
ATGAATCCGGAACACCGGAAATCCAGTTTCACCGGCCCCATGAACGAGATCACCCGGTTCGCTCCGAAAGCCGCAAAAGC
GACAAGCATACTCAGAGCACTGGCGCTCATGGTGCTCGCGTCCCTGATGCTTACGCTTGGCGCATGCCAGAGCATACGGC
CACTCTCCGATCGCATGGAGAGCAAATATAGTTTAAAAAAGAGAAAAACTTCTATCTCACGCCTCCGTCCTCAAGGCCCG
GAACGGTGCAGTGTGCCGGTACAGGTTTCCGCACGGGCCTTCAGGGCGATGCTCGATTCTATCGAAGAGGCCAGAGGAGT
GAAATATCGCTTTGGCGGAACCACGCCGGAAGGATTCGACTGCTCCGGCTTCGTGCAATATCTCTACAACCGTTCGTTCC
AGATGATCTTGCCCCGTGCCTCGAATGATCTCGCACTGGTGGGCCCGATCATTCACAGAGATCGCCTGCAACCCGGTGAC
CTGGTCTTTTTCGCCGCCGGGGACGAGATTACCCACGTCGGAGTCTACCTCGGTAACGAACGCTTCGCCCACGCATCTTC
AAAAGCAGGCATCAGCATCAGCACGCTTTCCCAGAGCTATTACGCCACCCATTTCGCTTTCGGCACGAGGATCATCCGGG
TTGAGTAG

Upstream 100 bases:

>100_bases
TTCATGACTACCATACTCTCAATCGAAAGAATTGGATTTTGATTGTTTCAGGATCGTTTTCCGGTTCGGATTTACTATAC
TTCCATGATCGACTCACTTC

Downstream 100 bases:

>100_bases
CCACGCGGATGATCCTTGAAGTTTCGTGGTTCTTTTCCATCAGTCCCAAAAGTCTTGTCAGCCCCCCATCGTTCCATTCT
CGCCGTTTTGCTATCTTCCC

Product: NLP/P60 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNPEHRKSSFTGPMNEITRFAPKAAKATSILRALALMVLASLMLTLGACQSIRPLSDRMESKYSLKKRKTSISRLRPQGP
ERCSVPVQVSARAFRAMLDSIEEARGVKYRFGGTTPEGFDCSGFVQYLYNRSFQMILPRASNDLALVGPIIHRDRLQPGD
LVFFAAGDEITHVGVYLGNERFAHASSKAGISISTLSQSYYATHFAFGTRIIRVE

Sequences:

>Translated_215_residues
MNPEHRKSSFTGPMNEITRFAPKAAKATSILRALALMVLASLMLTLGACQSIRPLSDRMESKYSLKKRKTSISRLRPQGP
ERCSVPVQVSARAFRAMLDSIEEARGVKYRFGGTTPEGFDCSGFVQYLYNRSFQMILPRASNDLALVGPIIHRDRLQPGD
LVFFAAGDEITHVGVYLGNERFAHASSKAGISISTLSQSYYATHFAFGTRIIRVE
>Mature_215_residues
MNPEHRKSSFTGPMNEITRFAPKAAKATSILRALALMVLASLMLTLGACQSIRPLSDRMESKYSLKKRKTSISRLRPQGP
ERCSVPVQVSARAFRAMLDSIEEARGVKYRFGGTTPEGFDCSGFVQYLYNRSFQMILPRASNDLALVGPIIHRDRLQPGD
LVFFAAGDEITHVGVYLGNERFAHASSKAGISISTLSQSYYATHFAFGTRIIRVE

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=116, Percent_Identity=38.7931034482759, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788001, Length=118, Percent_Identity=39.8305084745763, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787944, Length=128, Percent_Identity=35.9375, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786421, Length=182, Percent_Identity=32.4175824175824, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 23838; Mature: 23838

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEHRKSSFTGPMNEITRFAPKAAKATSILRALALMVLASLMLTLGACQSIRPLSDRME
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SKYSLKKRKTSISRLRPQGPERCSVPVQVSARAFRAMLDSIEEARGVKYRFGGTTPEGFD
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
CSGFVQYLYNRSFQMILPRASNDLALVGPIIHRDRLQPGDLVFFAAGDEITHVGVYLGNE
HHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHCCCCCCCEEEEECCCCEEEEEEEECCC
RFAHASSKAGISISTLSQSYYATHFAFGTRIIRVE
HHCCCCCCCCEEHHHHHHHHHHHHHHHCEEEEEEC
>Mature Secondary Structure
MNPEHRKSSFTGPMNEITRFAPKAAKATSILRALALMVLASLMLTLGACQSIRPLSDRME
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SKYSLKKRKTSISRLRPQGPERCSVPVQVSARAFRAMLDSIEEARGVKYRFGGTTPEGFD
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
CSGFVQYLYNRSFQMILPRASNDLALVGPIIHRDRLQPGDLVFFAAGDEITHVGVYLGNE
HHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHCCCCCCCEEEEECCCCEEEEEEEECCC
RFAHASSKAGISISTLSQSYYATHFAFGTRIIRVE
HHCCCCCCCCEEHHHHHHHHHHHHHHHCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]