| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pyrE [H]
Identifier: 21672924
GI number: 21672924
Start: 78362
End: 78919
Strand: Direct
Name: pyrE [H]
Synonym: CT0083
Alternate gene names: 21672924
Gene position: 78362-78919 (Clockwise)
Preceding gene: 21672923
Following gene: 21672925
Centisome position: 3.64
GC content: 62.01
Gene sequence:
>558_bases ATGTTCAAGTCGAGCGGCGCCTTGCTCGATGGCCATTTCCGGCTCACTTCTGGCCGCCACAGCAACTCCTATTTCCAGTG CGCCAAGGTGCTGCAATACCCGGAATATCTTTCGGCGATCTGCGGCCAAATCGCCGGATTTTTCAGGGAGAGCGGCATCA CGACGGTCATTTCGCCCGCCATTGGCGGCATCGTCGTCGGCACGGAGGTCGGTCGGCAGCTTGGCGTCAAGACTATCTTC GCCGAACGCAAAGAGGGTGCGATGATGATCCGGCGCGGCTTCTCCATCGATCCCTCCGAGCAGGTGCTGGTGGTCGAGGA TGTAATCACCACCGGTGGCTCCGTCGCCGAGGTGATCGAGCTGGTCAAGGCCGCCGGAGCGACTGTGGCCGGAGTCGCCT CGGTAGTTGACCGTAGCAACGGCAAGGTACGGCTGGCGGACAAGCAGTTCTCGCTGCTCACGATGGAGGTGGTCAGCTAC GCGCCGGAGGAGTGCCCGCTCTGCAAGGAGGAAATCCCGATTTACGCGCCGGGCAGCCGAACCAATCCCCAGTGCTGA
Upstream 100 bases:
>100_bases TCTTTATCGTTAGGTGTCTGGTGTTTGCGGATACCCGGAATTTCCTTTTTCACGCATCATTGACCGATTTTTCCTCATGA CCAATTCGGAAACCCTCGCG
Downstream 100 bases:
>100_bases GCAGCCAGATGCAGCAGGGCATCCACACCATTTCGTTCGTCGGACTCGGGCTTATCGGCGCCTCGCTGATGCAGGCGCTC AAGCGCGCTGCCGGGGCGAC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFKSSGALLDGHFRLTSGRHSNSYFQCAKVLQYPEYLSAICGQIAGFFRESGITTVISPAIGGIVVGTEVGRQLGVKTIF AERKEGAMMIRRGFSIDPSEQVLVVEDVITTGGSVAEVIELVKAAGATVAGVASVVDRSNGKVRLADKQFSLLTMEVVSY APEECPLCKEEIPIYAPGSRTNPQC
Sequences:
>Translated_185_residues MFKSSGALLDGHFRLTSGRHSNSYFQCAKVLQYPEYLSAICGQIAGFFRESGITTVISPAIGGIVVGTEVGRQLGVKTIF AERKEGAMMIRRGFSIDPSEQVLVVEDVITTGGSVAEVIELVKAAGATVAGVASVVDRSNGKVRLADKQFSLLTMEVVSY APEECPLCKEEIPIYAPGSRTNPQC >Mature_185_residues MFKSSGALLDGHFRLTSGRHSNSYFQCAKVLQYPEYLSAICGQIAGFFRESGITTVISPAIGGIVVGTEVGRQLGVKTIF AERKEGAMMIRRGFSIDPSEQVLVVEDVITTGGSVAEVIELVKAAGATVAGVASVVDRSNGKVRLADKQFSLLTMEVVSY APEECPLCKEEIPIYAPGSRTNPQC
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023031 - InterPro: IPR006273 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 19750; Mature: 19750
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSSGALLDGHFRLTSGRHSNSYFQCAKVLQYPEYLSAICGQIAGFFRESGITTVISPA CCCCCCCEEECEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEHHC IGGIVVGTEVGRQLGVKTIFAERKEGAMMIRRGFSIDPSEQVLVVEDVITTGGSVAEVIE CCCEEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEHHHHCCCCHHHHHH LVKAAGATVAGVASVVDRSNGKVRLADKQFSLLTMEVVSYAPEECPLCKEEIPIYAPGSR HHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCEECCCCC TNPQC CCCCC >Mature Secondary Structure MFKSSGALLDGHFRLTSGRHSNSYFQCAKVLQYPEYLSAICGQIAGFFRESGITTVISPA CCCCCCCEEECEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEHHC IGGIVVGTEVGRQLGVKTIFAERKEGAMMIRRGFSIDPSEQVLVVEDVITTGGSVAEVIE CCCEEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEHHHHCCCCHHHHHH LVKAAGATVAGVASVVDRSNGKVRLADKQFSLLTMEVVSYAPEECPLCKEEIPIYAPGSR HHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCEECCCCC TNPQC CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA