Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21672913

Identifier: 21672913

GI number: 21672913

Start: 70817

End: 72238

Strand: Direct

Name: 21672913

Synonym: CT0072

Alternate gene names: NA

Gene position: 70817-72238 (Clockwise)

Preceding gene: 21672912

Following gene: 21672914

Centisome position: 3.29

GC content: 62.66

Gene sequence:

>1422_bases
ATGGCGTGGAACAAGCAAGTCGCCCTGGTCTTTCTGCCCTCCGACAGCGGCGTCGATGGCGCACGCTCGCTCTACGGTGA
CACCGAGCCGCCCGGCCTGAGGCGATGGCTCGACAGTGGCGTCCGGAACCTCATCAAACGAACACAGTTCGCTATTCCGC
CGCTTGCCCTGATGATCCTTGCCTCGATCGAGGTGCCCGGCGTCGAACAGACGCTCTGCGACCTCCGGTTCGAGGAGTTT
CCCTTCGACCGGCAATGGGATCTGGTCGGCATCAGCGTGCAGACCGGCATGGCCTCGAAAGCTTTCGAACTGGCCGACCG
CTTGCGGAGCCGGGGTGTCAAAGTCGTGCTCGGCGGCCCGCACGTCACCATGTTCCCCGACTCATGCCGCGCGCACGCGG
ATTGCCTCGTGCACGGCGAGGCGGACGACCTCTGGCGCGATGTGCTCGCAGATCTCGTCACCGATTCGCTCAAAGCCGAG
TACCGCCCGGACGCCCCTCCGGACTTGCAGCTTCACCGCCCGGTGAGCCGCGCCTCGCTGAAAAAAAACCGCTACTTCAC
CACCAACCTCGTCCAGACCGGACGAGGCTGCCCCTACCAGTGCGACTTCTGCAACGTCCACGTGCTGAACGGCAGGGTGC
TCCGGCAGCGCAAAATCGACCACATTGTCGATGAGGTGCGACGCTTCAGCGAGGAGGACAAGCGCATCTTCTTTTTTGTG
GACGACTCCATCAACGGCGACCCGCTCTTCGCGCGGGAGCTGTTCAAACACCTGATTCCGCTCAACATCACCTGGTTTGG
TCAGGCGACCACCGCGCTCGGCCAGCAGCCGGAGCTGCTCGACACCTTTGCCCGCTCCGGCTGCCGCGCGCTGCTCGTGG
GCATCGAGAGCATCGAGCCGTCGAGCCGCATCGCCCACAAGAAGACGCAGAACCGTACCGACGAACTGGCGGGCAACATC
CGGGCGATCCGAAAGAGCGGCATAAGTCTTTACGGAAGCTTCATCTACGGTCTCGACGGTGACACACTCCAGACGCCGCA
AGCCATCCTCGACTTCATCGCCGACACCCGCCTCGACGTGCCTGGTATCAACACACTCCGCCCTATTCCCGGCACGAAGG
TGTTCGACCGCCTGCGCGAGGAGGGACGGCTGCTCTTCGACCCGGAGGACATCACCTCGTTCCGCTACACCTTCGGCCAG
GAGATGCTTTACCGCCCGAAAAACATTCCGCTGCCGGAGTTCATCGAAAGCTACTCCGAGTTGACGCGCAAGGTCTTCAA
TATCGGCAACGCCATCCGGCGCGGGCTGGAAGCGCCGGGCATCAACGCCGCCGTGCTTTTTTTCAACCTGTTTTACACCC
ATCTCTACCGCCTGTCGAGAAACGATCTCCGCAAGCAGCTCGAAACCCTCGGAAGCGCCTGA

Upstream 100 bases:

>100_bases
TCGAAAATGCCCGCCAGGAGGAGGCGCGCCAGATGCGCAAATATTTCAAGCCGCTGCCGACCAAGCCTTCGGAGCAGAAC
CAACCCGACTGGTAAGCCAG

Downstream 100 bases:

>100_bases
AAGTGTTTTGAGCGGAGACGAATTATGATTAAAATGAAGTTCGTCTTATTTTAGCGAGGATACTCCCAACGACAACACCG
ATAAATCAAGGAGAAAGCCA

Product: BchE/P-methylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MAWNKQVALVFLPSDSGVDGARSLYGDTEPPGLRRWLDSGVRNLIKRTQFAIPPLALMILASIEVPGVEQTLCDLRFEEF
PFDRQWDLVGISVQTGMASKAFELADRLRSRGVKVVLGGPHVTMFPDSCRAHADCLVHGEADDLWRDVLADLVTDSLKAE
YRPDAPPDLQLHRPVSRASLKKNRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIDHIVDEVRRFSEEDKRIFFFV
DDSINGDPLFARELFKHLIPLNITWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRIAHKKTQNRTDELAGNI
RAIRKSGISLYGSFIYGLDGDTLQTPQAILDFIADTRLDVPGINTLRPIPGTKVFDRLREEGRLLFDPEDITSFRYTFGQ
EMLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGLEAPGINAAVLFFNLFYTHLYRLSRNDLRKQLETLGSA

Sequences:

>Translated_473_residues
MAWNKQVALVFLPSDSGVDGARSLYGDTEPPGLRRWLDSGVRNLIKRTQFAIPPLALMILASIEVPGVEQTLCDLRFEEF
PFDRQWDLVGISVQTGMASKAFELADRLRSRGVKVVLGGPHVTMFPDSCRAHADCLVHGEADDLWRDVLADLVTDSLKAE
YRPDAPPDLQLHRPVSRASLKKNRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIDHIVDEVRRFSEEDKRIFFFV
DDSINGDPLFARELFKHLIPLNITWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRIAHKKTQNRTDELAGNI
RAIRKSGISLYGSFIYGLDGDTLQTPQAILDFIADTRLDVPGINTLRPIPGTKVFDRLREEGRLLFDPEDITSFRYTFGQ
EMLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGLEAPGINAAVLFFNLFYTHLYRLSRNDLRKQLETLGSA
>Mature_472_residues
AWNKQVALVFLPSDSGVDGARSLYGDTEPPGLRRWLDSGVRNLIKRTQFAIPPLALMILASIEVPGVEQTLCDLRFEEFP
FDRQWDLVGISVQTGMASKAFELADRLRSRGVKVVLGGPHVTMFPDSCRAHADCLVHGEADDLWRDVLADLVTDSLKAEY
RPDAPPDLQLHRPVSRASLKKNRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIDHIVDEVRRFSEEDKRIFFFVD
DSINGDPLFARELFKHLIPLNITWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRIAHKKTQNRTDELAGNIR
AIRKSGISLYGSFIYGLDGDTLQTPQAILDFIADTRLDVPGINTLRPIPGTKVFDRLREEGRLLFDPEDITSFRYTFGQE
MLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGLEAPGINAAVLFFNLFYTHLYRLSRNDLRKQLETLGSA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53528; Mature: 53397

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWNKQVALVFLPSDSGVDGARSLYGDTEPPGLRRWLDSGVRNLIKRTQFAIPPLALMIL
CCCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASIEVPGVEQTLCDLRFEEFPFDRQWDLVGISVQTGMASKAFELADRLRSRGVKVVLGGP
HHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCC
HVTMFPDSCRAHADCLVHGEADDLWRDVLADLVTDSLKAEYRPDAPPDLQLHRPVSRASL
EEEECCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHH
KKNRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIDHIVDEVRRFSEEDKRIFFFV
HCCCCEEHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DDSINGDPLFARELFKHLIPLNITWFGQATTALGQQPELLDTFARSGCRALLVGIESIEP
ECCCCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEHHHHCCCC
SSRIAHKKTQNRTDELAGNIRAIRKSGISLYGSFIYGLDGDTLQTPQAILDFIADTRLDV
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEEHEEECCCCCCCCCHHHHHHHHHHCCCCC
PGINTLRPIPGTKVFDRLREEGRLLFDPEDITSFRYTFGQEMLYRPKNIPLPEFIESYSE
CCCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LTRKVFNIGNAIRRGLEAPGINAAVLFFNLFYTHLYRLSRNDLRKQLETLGSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AWNKQVALVFLPSDSGVDGARSLYGDTEPPGLRRWLDSGVRNLIKRTQFAIPPLALMIL
CCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASIEVPGVEQTLCDLRFEEFPFDRQWDLVGISVQTGMASKAFELADRLRSRGVKVVLGGP
HHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCC
HVTMFPDSCRAHADCLVHGEADDLWRDVLADLVTDSLKAEYRPDAPPDLQLHRPVSRASL
EEEECCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHH
KKNRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIDHIVDEVRRFSEEDKRIFFFV
HCCCCEEHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DDSINGDPLFARELFKHLIPLNITWFGQATTALGQQPELLDTFARSGCRALLVGIESIEP
ECCCCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEHHHHCCCC
SSRIAHKKTQNRTDELAGNIRAIRKSGISLYGSFIYGLDGDTLQTPQAILDFIADTRLDV
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEEHEEECCCCCCCCCHHHHHHHHHHCCCCC
PGINTLRPIPGTKVFDRLREEGRLLFDPEDITSFRYTFGQEMLYRPKNIPLPEFIESYSE
CCCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LTRKVFNIGNAIRRGLEAPGINAAVLFFNLFYTHLYRLSRNDLRKQLETLGSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]