Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21672882

Identifier: 21672882

GI number: 21672882

Start: 40306

End: 40773

Strand: Reverse

Name: 21672882

Synonym: CT0041

Alternate gene names: NA

Gene position: 40773-40306 (Counterclockwise)

Preceding gene: 21672883

Following gene: 21672881

Centisome position: 1.89

GC content: 53.42

Gene sequence:

>468_bases
GTGAACGTTTTGAAATCCGCTGAAAAGCCGTTTGCCGGTTTCGTTGGCAGGCCGGGCAAAATTTTGGGGAAGGAGGACGG
GAGCAACATGGCAAGCTATGAGCTTGGTGTCGTCGATGTGAGGGAGCGGCGGCCATTCGGCTTCGATCCGGAGCCATTTC
GCAAAGCATCACCACAGGCGAATTCGCCCGAAATTTTCGATATAGACTCACTCTTGCGCCTGAGAACGTTCGTTTACCTC
CTCTTGGGGACTGTGCTGTTTCTGGTGCAGATCAACAATACCCTGGCGATCAATGACCTGGCCAAGCGCAACGAACGCTT
GCGGGAACAGCTCAGGATCAGTACCAGCATCTCGACTGCTGAAAAGCTAAAGAGCCGGGAGCTTCAGAGCATCCGGTACA
TCTCCGGTTATGCCAAAAATCTCGGACTCGACTCCTCATTCATTCCTCCGGTCGAGATTGAACCCTGA

Upstream 100 bases:

>100_bases
CCGCTCGAAGCCACGGCTGAAGAAATCAGCCGCAATCCGAGATCGAGAAGTGCGCGTCTCAGAGTCATTCAGAAACTGTA
ACCTTCAGAGGAGGTAAGTC

Downstream 100 bases:

>100_bases
CAGCACCCCTCTTTTATCGAAGAATGCATGAACCAGGCGAGAACAACACCGGAGAACCACCGCGGCACCAGCGACCATGA
ATTCAGCCTGCGCCTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL
LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP

Sequences:

>Translated_155_residues
MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL
LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP
>Mature_155_residues
MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL
LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17415; Mature: 17415

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQA
CCCCCCCCCCCHHHCCCCCCEECCCCCCCCCEEECCEEECCCCCCCCCCCCCHHHCCCCC
NSPEIFDIDSLLRLRTFVYLLLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTA
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
EKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQA
CCCCCCCCCCCHHHCCCCCCEECCCCCCCCCEEECCEEECCCCCCCCCCCCCHHHCCCCC
NSPEIFDIDSLLRLRTFVYLLLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTA
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
EKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA