| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672882
Identifier: 21672882
GI number: 21672882
Start: 40306
End: 40773
Strand: Reverse
Name: 21672882
Synonym: CT0041
Alternate gene names: NA
Gene position: 40773-40306 (Counterclockwise)
Preceding gene: 21672883
Following gene: 21672881
Centisome position: 1.89
GC content: 53.42
Gene sequence:
>468_bases GTGAACGTTTTGAAATCCGCTGAAAAGCCGTTTGCCGGTTTCGTTGGCAGGCCGGGCAAAATTTTGGGGAAGGAGGACGG GAGCAACATGGCAAGCTATGAGCTTGGTGTCGTCGATGTGAGGGAGCGGCGGCCATTCGGCTTCGATCCGGAGCCATTTC GCAAAGCATCACCACAGGCGAATTCGCCCGAAATTTTCGATATAGACTCACTCTTGCGCCTGAGAACGTTCGTTTACCTC CTCTTGGGGACTGTGCTGTTTCTGGTGCAGATCAACAATACCCTGGCGATCAATGACCTGGCCAAGCGCAACGAACGCTT GCGGGAACAGCTCAGGATCAGTACCAGCATCTCGACTGCTGAAAAGCTAAAGAGCCGGGAGCTTCAGAGCATCCGGTACA TCTCCGGTTATGCCAAAAATCTCGGACTCGACTCCTCATTCATTCCTCCGGTCGAGATTGAACCCTGA
Upstream 100 bases:
>100_bases CCGCTCGAAGCCACGGCTGAAGAAATCAGCCGCAATCCGAGATCGAGAAGTGCGCGTCTCAGAGTCATTCAGAAACTGTA ACCTTCAGAGGAGGTAAGTC
Downstream 100 bases:
>100_bases CAGCACCCCTCTTTTATCGAAGAATGCATGAACCAGGCGAGAACAACACCGGAGAACCACCGCGGCACCAGCGACCATGA ATTCAGCCTGCGCCTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP
Sequences:
>Translated_155_residues MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP >Mature_155_residues MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQANSPEIFDIDSLLRLRTFVYL LLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTAEKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17415; Mature: 17415
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQA CCCCCCCCCCCHHHCCCCCCEECCCCCCCCCEEECCEEECCCCCCCCCCCCCHHHCCCCC NSPEIFDIDSLLRLRTFVYLLLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTA CCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH EKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNVLKSAEKPFAGFVGRPGKILGKEDGSNMASYELGVVDVRERRPFGFDPEPFRKASPQA CCCCCCCCCCCHHHCCCCCCEECCCCCCCCCEEECCEEECCCCCCCCCCCCCHHHCCCCC NSPEIFDIDSLLRLRTFVYLLLGTVLFLVQINNTLAINDLAKRNERLREQLRISTSISTA CCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH EKLKSRELQSIRYISGYAKNLGLDSSFIPPVEIEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA