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The map label for this gene is yfiH [C]

Identifier: 21672867

GI number: 21672867

Start: 21622

End: 22392

Strand: Direct

Name: yfiH [C]

Synonym: CT0026

Alternate gene names: 21672867

Gene position: 21622-22392 (Clockwise)

Preceding gene: 21672866

Following gene: 21672869

Centisome position: 1.0

GC content: 61.48

Gene sequence:

>771_bases
ATGAACCATACTTCGGGTATAACACCTCTCCACCCCTCAATCTTTCACAACATTCTCGGCCTTGTGGCGCTTCAGACTAC
CCGCGTCGGCGGGGTGAGTGCTTCACCGCTGGATTCGTTGAATCTCGGGACTCACGTCGGAGACGATCCGGAGCGTGTGC
GGGAAAATGAGCGACGGCTTTGCGCTTTTCTGGAGATTAGTTGCGAGAGCATCGTGACAACCGGGCAAGTGCACGGGACG
GAGATTGCCGTCGTTACCGGGCCGGGGAAACTCGACGGGTATGACGCGCTCATCACCACCGTTCGCGGACTTTTCGTCGG
CATCCTGACAGCCGATTGCTACCCGATCCTGATTTACGACCGCCGGACGAGGGCCTGCGGCGCAGCTCATGCGGGGTGGC
AGGGCACGGCGGGACGGATCGCTGAAAAGACGGTCAACGCCATGCACAACTCGTTCGGCACCCGTCCGGAGGATTGCCTC
GCCTGGGTCGGCACCGGCATCTCCGGTGAATGCTACGAAATCGGCGGCGAAGTCGCTGCCCGCTTCAGTAGCCGCTATCT
CAAGCCGTCGCCCTCCGGTGAAGGGCGGCAACTGCTCGACCTCTCGGCGGCCAACCGAGACCAGCTCATCGAAGCAGGCA
TCCCGCCATCGCAGGTGCAGTGCTCGGAGCTCTGCTCATACCGAGACGCCGACCGCTTTTTCTCCTACCGCCGTGACAAC
GGCAAAACCGGTCGGATGCTCGCGCTGATAGGACTCAGGCATTCTGACTGA

Upstream 100 bases:

>100_bases
TTCAGTCACTCCGCTCAGCTTTACCGTTACATCTACCTGCGAAAGATCTACCTGCGAAAGCACCCCTTTTCACGCATATG
AACAGATAATTATCAGAACC

Downstream 100 bases:

>100_bases
GACCCCTGACCGCTACCAGCATGGTGCCGAGTTTTTCCTCGAGTGCTTTGATGGTGGCGAGGTCGGCTTCGCTGAGGTCG
TCGGAAACGACATCATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNHTSGITPLHPSIFHNILGLVALQTTRVGGVSASPLDSLNLGTHVGDDPERVRENERRLCAFLEISCESIVTTGQVHGT
EIAVVTGPGKLDGYDALITTVRGLFVGILTADCYPILIYDRRTRACGAAHAGWQGTAGRIAEKTVNAMHNSFGTRPEDCL
AWVGTGISGECYEIGGEVAARFSSRYLKPSPSGEGRQLLDLSAANRDQLIEAGIPPSQVQCSELCSYRDADRFFSYRRDN
GKTGRMLALIGLRHSD

Sequences:

>Translated_256_residues
MNHTSGITPLHPSIFHNILGLVALQTTRVGGVSASPLDSLNLGTHVGDDPERVRENERRLCAFLEISCESIVTTGQVHGT
EIAVVTGPGKLDGYDALITTVRGLFVGILTADCYPILIYDRRTRACGAAHAGWQGTAGRIAEKTVNAMHNSFGTRPEDCL
AWVGTGISGECYEIGGEVAARFSSRYLKPSPSGEGRQLLDLSAANRDQLIEAGIPPSQVQCSELCSYRDADRFFSYRRDN
GKTGRMLALIGLRHSD
>Mature_256_residues
MNHTSGITPLHPSIFHNILGLVALQTTRVGGVSASPLDSLNLGTHVGDDPERVRENERRLCAFLEISCESIVTTGQVHGT
EIAVVTGPGKLDGYDALITTVRGLFVGILTADCYPILIYDRRTRACGAAHAGWQGTAGRIAEKTVNAMHNSFGTRPEDCL
AWVGTGISGECYEIGGEVAARFSSRYLKPSPSGEGRQLLDLSAANRDQLIEAGIPPSQVQCSELCSYRDADRFFSYRRDN
GKTGRMLALIGLRHSD

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=240, Percent_Identity=32.5, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI190194372, Length=240, Percent_Identity=32.5, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788945, Length=238, Percent_Identity=37.8151260504202, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27603; Mature: 27603

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTSGITPLHPSIFHNILGLVALQTTRVGGVSASPLDSLNLGTHVGDDPERVRENERRL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHE
CAFLEISCESIVTTGQVHGTEIAVVTGPGKLDGYDALITTVRGLFVGILTADCYPILIYD
EHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
RRTRACGAAHAGWQGTAGRIAEKTVNAMHNSFGTRPEDCLAWVGTGISGECYEIGGEVAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
RFSSRYLKPSPSGEGRQLLDLSAANRDQLIEAGIPPSQVQCSELCSYRDADRFFSYRRDN
HHHHCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCCCCCHHHHHCCCCHHHHHHHHCCC
GKTGRMLALIGLRHSD
CCCCCEEEEEEECCCC
>Mature Secondary Structure
MNHTSGITPLHPSIFHNILGLVALQTTRVGGVSASPLDSLNLGTHVGDDPERVRENERRL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHE
CAFLEISCESIVTTGQVHGTEIAVVTGPGKLDGYDALITTVRGLFVGILTADCYPILIYD
EHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
RRTRACGAAHAGWQGTAGRIAEKTVNAMHNSFGTRPEDCLAWVGTGISGECYEIGGEVAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
RFSSRYLKPSPSGEGRQLLDLSAANRDQLIEAGIPPSQVQCSELCSYRDADRFFSYRRDN
HHHHCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCCCCCHHHHHCCCCHHHHHHHHCCC
GKTGRMLALIGLRHSD
CCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]