| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is pepA
Identifier: 21672630
GI number: 21672630
Start: 405137
End: 406645
Strand: Reverse
Name: pepA
Synonym: BUsg355
Alternate gene names: 21672630
Gene position: 406645-405137 (Counterclockwise)
Preceding gene: 21672635
Following gene: 21672629
Centisome position: 63.39
GC content: 26.57
Gene sequence:
>1509_bases ATGAAATTTTTTATAAAAAATGTTCTTTTAGAAGAAGAAAAAAGTGATTGTATTGTAATTGGCGTTTTTGAATTTTGTGA ATTTAAATATTCAAACAATTATTTAAATAAATCTATTTGTAGTTATATTAATAATTTTATTAAAAAAGGTGATATGCAAG GAAAAGTAGGTGAAACACTTTTATTGTATGATGTTCCTAATGTTGTTTCTAAAAGAATACTACTCGTAGGATGCGGTAAA AAAAATAGATTAAATAGATATTATCTTGATAAGATCATAAATAAAAGTATGAAAATTTTAAATAAATTTTCTATTAAAAA TATTATTTTTTCTTTAACTGAAATAAATATTGAAAATTATGATATATATTGGTCGATTAGGACAATAGTTAATTCTATCA ATAAATATTTATATAAAAATTTTAAGATAAATGCTTTTTTAAAAAAAGAGGTTTATTTAAATTCAATTTCATTTCATATA ATAGAAAAAAAAGATTTTCATATAGCAAATAATTCTTTAAAACATGCTTTAGCAATTAATTCTGGCATTACAGCTGCAAA AAATTTAGCTGATTTACCACCTAATATTTGTAATCCATTATACTTATCTTTACAAGCTCAAAAATTATCTGAAAAATATA AAGATAAAATCCATGTTACATCTATTGACATTAAAGAAATGAATAATTTAGGTATGAACGCCTATGTGGCAGTTGGAAAG GGATCTAAAAATAAACCGTATATGTCTGTAATCAAATATTCTGGAATAAATAATACTGAACAAGAAAAAATTATTGTATT AATAGGAAAGGGATTAACATTTGATTCTGGAGGTATATCTATTAAACCGTCTAACAATATGAATGAAATGAAGTATGACA TGTGCGGTGCTGCGGCAGTATATGGCACTTTAATTGCTGCAGCTAAATTAAATTTACCACTAACTATTATAGGTATTTTA GCAGGTTGTGAAAATATGCCAGGAGGAAATGCATTTAGACCTGGTGATATTATAACTACGATGTCAGGTAAAACAGTAGA AATATTAAATACTGATGCTGAAGGACGTTTAGTTTTATGTGATGTTTTAACATATGTACAGCGTTTTTCTCCAAACATAG TTATTGATATTGCTACCTTAACTGGAGCATGTGTTGTCGCATTAGGAAATCATTTTAGCGGTCTTTTTTCAAACGATGAT CAACTTGCTTATGCATTAGAAAAATCATCAAGACAAACTAACGATAAAATATGGCGTTTGCCTCTATCTTTAGAATATGA AAAAGAGTTACATTCTAATTTTGCGGATCTTTCAAATGTTGGAAGAGGTAAAGCAGGTGCAATAACTGCTTCTTGTTTTC TTGCTCAATTTTCGAAAAAATATACTTGGGCTCATTTAGATATTGCTGGAACTGCTTGGAAATCTGGTAAAAATCACGGT GCAACAGGTCGTCCTGTTGAACTATTAAGTCAATTTTTATTAAATGAATCTAATTTTTTAAAATTTTAA
Upstream 100 bases:
>100_bases TTATATAGTATATAATATTTTTTTATATTTTATTTATTTTTTTAATAAATAAAAAGTATAATTAACTAACAACTTTGATT ATGTTTTTTGAGAAAAAATT
Downstream 100 bases:
>100_bases ATAATATAAAAAAATTTATTTTTTTGATGCAGCAATATTGCTATTTTTTAAATCATAAATACAGTTGAATATAATGAAAA AAAATTATAACCCTAAAGAT
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKFFIKNVLLEEEKSDCIVIGVFEFCEFKYSNNYLNKSICSYINNFIKKGDMQGKVGETLLLYDVPNVVSKRILLVGCGK KNRLNRYYLDKIINKSMKILNKFSIKNIIFSLTEINIENYDIYWSIRTIVNSINKYLYKNFKINAFLKKEVYLNSISFHI IEKKDFHIANNSLKHALAINSGITAAKNLADLPPNICNPLYLSLQAQKLSEKYKDKIHVTSIDIKEMNNLGMNAYVAVGK GSKNKPYMSVIKYSGINNTEQEKIIVLIGKGLTFDSGGISIKPSNNMNEMKYDMCGAAAVYGTLIAAAKLNLPLTIIGIL AGCENMPGGNAFRPGDIITTMSGKTVEILNTDAEGRLVLCDVLTYVQRFSPNIVIDIATLTGACVVALGNHFSGLFSNDD QLAYALEKSSRQTNDKIWRLPLSLEYEKELHSNFADLSNVGRGKAGAITASCFLAQFSKKYTWAHLDIAGTAWKSGKNHG ATGRPVELLSQFLLNESNFLKF
Sequences:
>Translated_502_residues MKFFIKNVLLEEEKSDCIVIGVFEFCEFKYSNNYLNKSICSYINNFIKKGDMQGKVGETLLLYDVPNVVSKRILLVGCGK KNRLNRYYLDKIINKSMKILNKFSIKNIIFSLTEINIENYDIYWSIRTIVNSINKYLYKNFKINAFLKKEVYLNSISFHI IEKKDFHIANNSLKHALAINSGITAAKNLADLPPNICNPLYLSLQAQKLSEKYKDKIHVTSIDIKEMNNLGMNAYVAVGK GSKNKPYMSVIKYSGINNTEQEKIIVLIGKGLTFDSGGISIKPSNNMNEMKYDMCGAAAVYGTLIAAAKLNLPLTIIGIL AGCENMPGGNAFRPGDIITTMSGKTVEILNTDAEGRLVLCDVLTYVQRFSPNIVIDIATLTGACVVALGNHFSGLFSNDD QLAYALEKSSRQTNDKIWRLPLSLEYEKELHSNFADLSNVGRGKAGAITASCFLAQFSKKYTWAHLDIAGTAWKSGKNHG ATGRPVELLSQFLLNESNFLKF >Mature_502_residues MKFFIKNVLLEEEKSDCIVIGVFEFCEFKYSNNYLNKSICSYINNFIKKGDMQGKVGETLLLYDVPNVVSKRILLVGCGK KNRLNRYYLDKIINKSMKILNKFSIKNIIFSLTEINIENYDIYWSIRTIVNSINKYLYKNFKINAFLKKEVYLNSISFHI IEKKDFHIANNSLKHALAINSGITAAKNLADLPPNICNPLYLSLQAQKLSEKYKDKIHVTSIDIKEMNNLGMNAYVAVGK GSKNKPYMSVIKYSGINNTEQEKIIVLIGKGLTFDSGGISIKPSNNMNEMKYDMCGAAAVYGTLIAAAKLNLPLTIIGIL AGCENMPGGNAFRPGDIITTMSGKTVEILNTDAEGRLVLCDVLTYVQRFSPNIVIDIATLTGACVVALGNHFSGLFSNDD QLAYALEKSSRQTNDKIWRLPLSLEYEKELHSNFADLSNVGRGKAGAITASCFLAQFSKKYTWAHLDIAGTAWKSGKNHG ATGRPVELLSQFLLNESNFLKF
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family
Homologues:
Organism=Homo sapiens, GI41393561, Length=326, Percent_Identity=41.7177914110429, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI47155554, Length=384, Percent_Identity=30.46875, Blast_Score=146, Evalue=5e-35, Organism=Escherichia coli, GI1790710, Length=501, Percent_Identity=51.8962075848303, Blast_Score=546, Evalue=1e-156, Organism=Escherichia coli, GI87082123, Length=278, Percent_Identity=43.1654676258993, Blast_Score=199, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17556903, Length=310, Percent_Identity=32.258064516129, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17565172, Length=176, Percent_Identity=30.1136363636364, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24661038, Length=499, Percent_Identity=28.8577154308617, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI21355725, Length=367, Percent_Identity=31.8801089918256, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI161077148, Length=318, Percent_Identity=34.9056603773585, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI20130057, Length=318, Percent_Identity=34.9056603773585, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI20129969, Length=317, Percent_Identity=33.1230283911672, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI20129963, Length=317, Percent_Identity=34.0694006309148, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24662227, Length=319, Percent_Identity=31.974921630094, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI21355645, Length=319, Percent_Identity=30.7210031347962, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24662223, Length=319, Percent_Identity=30.7210031347962, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI19922386, Length=319, Percent_Identity=32.2884012539185, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI221379063, Length=319, Percent_Identity=34.7962382445141, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI221379062, Length=319, Percent_Identity=34.7962382445141, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI21357381, Length=320, Percent_Identity=34.6875, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24646701, Length=363, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24646703, Length=363, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI21358201, Length=363, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AMPA_BUCAP (Q8K9I0)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660697.1 - ProteinModelPortal: Q8K9I0 - SMR: Q8K9I0 - MEROPS: M17.003 - EnsemblBacteria: EBBUCT00000000382 - GeneID: 1005800 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg355 - GeneTree: EBGT00050000008030 - HOGENOM: HBG742580 - OMA: LGHHISG - ProtClustDB: PRK00913 - BioCyc: BAPH198804:BUSG355-MONOMER - GO: GO:0005737 - GO: GO:0006508 - HAMAP: MF_00181 - InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 - PANTHER: PTHR11963:SF3 - PRINTS: PR00481
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N
EC number: =3.4.11.1; =3.4.11.10
Molecular weight: Translated: 56042; Mature: 56042
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00631 CYTOSOL_AP
Important sites: ACT_SITE 282-282 ACT_SITE 356-356
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFIKNVLLEEEKSDCIVIGVFEFCEFKYSNNYLNKSICSYINNFIKKGDMQGKVGETL CCHHHHHHHHCCCCCCEEEEEEHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE LLYDVPNVVSKRILLVGCGKKNRLNRYYLDKIINKSMKILNKFSIKNIIFSLTEINIENY EEEECCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECEECE DIYWSIRTIVNSINKYLYKNFKINAFLKKEVYLNSISFHIIEKKDFHIANNSLKHALAIN EEEEEHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEEEEC SGITAAKNLADLPPNICNPLYLSLQAQKLSEKYKDKIHVTSIDIKEMNNLGMNAYVAVGK CCCCHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCEEEEEEEEHHHHCCCCCEEEEEECC GSKNKPYMSVIKYSGINNTEQEKIIVLIGKGLTFDSGGISIKPSNNMNEMKYDMCGAAAV CCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCEEECCCCCCCHHHHHHHHHHHH YGTLIAAAKLNLPLTIIGILAGCENMPGGNAFRPGDIITTMSGKTVEILNTDAEGRLVLC HHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEHH DVLTYVQRFSPNIVIDIATLTGACVVALGNHFSGLFSNDDQLAYALEKSSRQTNDKIWRL HHHHHHHHCCCCEEEEEEHHHCCHHEECCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEE PLSLEYEKELHSNFADLSNVGRGKAGAITASCFLAQFSKKYTWAHLDIAGTAWKSGKNHG CCCEEHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC ATGRPVELLSQFLLNESNFLKF CCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKFFIKNVLLEEEKSDCIVIGVFEFCEFKYSNNYLNKSICSYINNFIKKGDMQGKVGETL CCHHHHHHHHCCCCCCEEEEEEHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE LLYDVPNVVSKRILLVGCGKKNRLNRYYLDKIINKSMKILNKFSIKNIIFSLTEINIENY EEEECCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECEECE DIYWSIRTIVNSINKYLYKNFKINAFLKKEVYLNSISFHIIEKKDFHIANNSLKHALAIN EEEEEHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEEEEC SGITAAKNLADLPPNICNPLYLSLQAQKLSEKYKDKIHVTSIDIKEMNNLGMNAYVAVGK CCCCHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCEEEEEEEEHHHHCCCCCEEEEEECC GSKNKPYMSVIKYSGINNTEQEKIIVLIGKGLTFDSGGISIKPSNNMNEMKYDMCGAAAV CCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCEEECCCCCCCHHHHHHHHHHHH YGTLIAAAKLNLPLTIIGILAGCENMPGGNAFRPGDIITTMSGKTVEILNTDAEGRLVLC HHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEHH DVLTYVQRFSPNIVIDIATLTGACVVALGNHFSGLFSNDDQLAYALEKSSRQTNDKIWRL HHHHHHHHCCCCEEEEEEHHHCCHHEECCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEE PLSLEYEKELHSNFADLSNVGRGKAGAITASCFLAQFSKKYTWAHLDIAGTAWKSGKNHG CCCEEHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC ATGRPVELLSQFLLNESNFLKF CCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438