| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is ybhE
Identifier: 21672561
GI number: 21672561
Start: 321600
End: 322601
Strand: Reverse
Name: ybhE
Synonym: BUsg282
Alternate gene names: 21672561
Gene position: 322601-321600 (Counterclockwise)
Preceding gene: 21672566
Following gene: 21672559
Centisome position: 50.29
GC content: 24.45
Gene sequence:
>1002_bases ATGCAACAAATTATTTATATTGCTAACGCGGAAAGTGAAAATATAGAGGTCTGGATTTTATATAACAACGGAGATATGAA ATTAATACAAACAGTTCAAACTGATGGTCAGGTACAACCTATTTCAATTATAAAAAATACAAAGTTATTATATGCTGGAA TTCGTCCTAAGAATCGTGTTATTACCTATCAGATAGATAAAAACGGTTTATTGAAAAAAAAAAAAGAAAGTATTGTTCCT GGTACTCCTAATTATATTTCTTTCGATAGCAGTGAAAAGTTTTTATTCTGTAGTTCTTATCATGCTGATTGCATAAGTGT AAGTCCATTAGACAAAAATGGAATTCCTAAAGACCCAATACAAATTATTCATAATATTGAAGGTTGTCATGCTGCTAAAT TCAATAGTAAATATAATGTTTTATTTATAACTTCATTAAAAAATGATTGTATTTATTTATATTACTTAACACATTTTGGT ATATTGAAAAGCACAGAACAAAAATTAGTTTTTTCTCAAAAAAATTCAGGACCACGTCATGTTATATTTCATCCTAATCA AAATTTTTCTTATACCGTTAATGAATTAAATGGTAGTGTTGACGTATGGAAAATATCTAAAGAAAATAAAGTATTAGAGG TAAAAAACATACAAAATATAAAATTATTAAATGATTTGATTTCAAAAAAATATTGGTCTTCTGATATTCACTTAACTTCA TGCGGCAATTTTTTATATGTATCCGATAGATATTTGAATAGTATTTCACTATTTCATGTTAATAAAAATGATAATACAAT TATTTTTTTTAAACAATATCTTACAGAAGAACAACCTCGTGCATTTTGTATTGATAGAAATAATAATTATTTAATAGTTA TTGGACAAAAATCTAATAAGTTAAGTGTATATAAAATTTGTCAAAAAACAGGTGAATTAAAAAAAATAAATCAATATCAA ACAGGTAACGGTCCTTTATGGATAACTTCATTTTTAATTTAA
Upstream 100 bases:
>100_bases ACAATATAAAATCAAAATAGATTAAAGTTATTCTTAAAAAATTTTATGAAGAATTATATAAAAAATATTTATTTTTTTAA AAAAATATTGAGGAAAATGT
Downstream 100 bases:
>100_bases ATTTTTCAAAGAGAAATATTATAAATTAAATATTTTCTACATTAAATAATGTATCATTATCTAAAGATTTTTCAATAACA TTGATAAGTTTTTTTAAACA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6-P-gluconolactonase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQQIIYIANAESENIEVWILYNNGDMKLIQTVQTDGQVQPISIIKNTKLLYAGIRPKNRVITYQIDKNGLLKKKKESIVP GTPNYISFDSSEKFLFCSSYHADCISVSPLDKNGIPKDPIQIIHNIEGCHAAKFNSKYNVLFITSLKNDCIYLYYLTHFG ILKSTEQKLVFSQKNSGPRHVIFHPNQNFSYTVNELNGSVDVWKISKENKVLEVKNIQNIKLLNDLISKKYWSSDIHLTS CGNFLYVSDRYLNSISLFHVNKNDNTIIFFKQYLTEEQPRAFCIDRNNNYLIVIGQKSNKLSVYKICQKTGELKKINQYQ TGNGPLWITSFLI
Sequences:
>Translated_333_residues MQQIIYIANAESENIEVWILYNNGDMKLIQTVQTDGQVQPISIIKNTKLLYAGIRPKNRVITYQIDKNGLLKKKKESIVP GTPNYISFDSSEKFLFCSSYHADCISVSPLDKNGIPKDPIQIIHNIEGCHAAKFNSKYNVLFITSLKNDCIYLYYLTHFG ILKSTEQKLVFSQKNSGPRHVIFHPNQNFSYTVNELNGSVDVWKISKENKVLEVKNIQNIKLLNDLISKKYWSSDIHLTS CGNFLYVSDRYLNSISLFHVNKNDNTIIFFKQYLTEEQPRAFCIDRNNNYLIVIGQKSNKLSVYKICQKTGELKKINQYQ TGNGPLWITSFLI >Mature_333_residues MQQIIYIANAESENIEVWILYNNGDMKLIQTVQTDGQVQPISIIKNTKLLYAGIRPKNRVITYQIDKNGLLKKKKESIVP GTPNYISFDSSEKFLFCSSYHADCISVSPLDKNGIPKDPIQIIHNIEGCHAAKFNSKYNVLFITSLKNDCIYLYYLTHFG ILKSTEQKLVFSQKNSGPRHVIFHPNQNFSYTVNELNGSVDVWKISKENKVLEVKNIQNIKLLNDLISKKYWSSDIHLTS CGNFLYVSDRYLNSISLFHVNKNDNTIIFFKQYLTEEQPRAFCIDRNNNYLIVIGQKSNKLSVYKICQKTGELKKINQYQ TGNGPLWITSFLI
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family
Homologues:
Organism=Escherichia coli, GI1786983, Length=329, Percent_Identity=37.0820668693009, Blast_Score=254, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_BUCAP (Q8K9N9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660628.1 - ProteinModelPortal: Q8K9N9 - SMR: Q8K9N9 - EnsemblBacteria: EBBUCT00000000002 - GeneID: 1005486 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg282 - GeneTree: EBGT00050000007987 - HOGENOM: HBG741123 - OMA: NIEGCHA - ProtClustDB: PRK11028 - BioCyc: BAPH198804:BUSG282-MONOMER - HAMAP: MF_01605 - InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR015943 - Gene3D: G3DSA:2.130.10.10
Pfam domain/function: PF10282 DUF2394
EC number: =3.1.1.31
Molecular weight: Translated: 38374; Mature: 38374
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQIIYIANAESENIEVWILYNNGDMKLIQTVQTDGQVQPISIIKNTKLLYAGIRPKNRV CCEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCEE ITYQIDKNGLLKKKKESIVPGTPNYISFDSSEKFLFCSSYHADCISVSPLDKNGIPKDPI EEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCHH QIIHNIEGCHAAKFNSKYNVLFITSLKNDCIYLYYLTHFGILKSTEQKLVFSQKNSGPRH HHHHCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHCCHHCCCCCEEEEEECCCCCCE VIFHPNQNFSYTVNELNGSVDVWKISKENKVLEVKNIQNIKLLNDLISKKYWSSDIHLTS EEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEE CGNFLYVSDRYLNSISLFHVNKNDNTIIFFKQYLTEEQPRAFCIDRNNNYLIVIGQKSNK CCCEEEEECCCCCEEEEEEEECCCCEEEEEEHHCCCCCCCEEEEECCCCEEEEEECCCCC LSVYKICQKTGELKKINQYQTGNGPLWITSFLI CHHHHHHHHCCCCEECCEEECCCCCEEEEEEEC >Mature Secondary Structure MQQIIYIANAESENIEVWILYNNGDMKLIQTVQTDGQVQPISIIKNTKLLYAGIRPKNRV CCEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCEE ITYQIDKNGLLKKKKESIVPGTPNYISFDSSEKFLFCSSYHADCISVSPLDKNGIPKDPI EEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCHH QIIHNIEGCHAAKFNSKYNVLFITSLKNDCIYLYYLTHFGILKSTEQKLVFSQKNSGPRH HHHHCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHCCHHCCCCCEEEEEECCCCCCE VIFHPNQNFSYTVNELNGSVDVWKISKENKVLEVKNIQNIKLLNDLISKKYWSSDIHLTS EEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEE CGNFLYVSDRYLNSISLFHVNKNDNTIIFFKQYLTEEQPRAFCIDRNNNYLIVIGQKSNK CCCEEEEECCCCCEEEEEEEECCCCEEEEEEHHCCCCCCCEEEEECCCCEEEEEECCCCC LSVYKICQKTGELKKINQYQTGNGPLWITSFLI CHHHHHHHHCCCCEECCEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438