| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is cls
Identifier: 21672542
GI number: 21672542
Start: 298432
End: 299892
Strand: Reverse
Name: cls
Synonym: BUsg262
Alternate gene names: 21672542
Gene position: 299892-298432 (Counterclockwise)
Preceding gene: 21672543
Following gene: 21672532
Centisome position: 46.75
GC content: 27.93
Gene sequence:
>1461_bases ATGGATATTTTCTATGATTTAATAAAATGGCTAGTTGTCTTAATATACTGGTTATTAATTGCTAATATTACCTATCGTAT TTTAATTAAACGTCGTAGTATACCCTCCTCCATGTCTTGGCTTTTGACTATTTATATAATTCCATTTATAGGAATAGCTA TTTGGTTTTTCTTTGGCGAATTGTATTTAGGAAAAAGACAAAAGAAAATAGCAAAAAAAATTTGGTCTATATCTAATACA TATCTTAATAAACTTAAATCTTATAAATATATATTTCAAATAAAAAATAGTGAAGTAGCTACTTCTTTATTTCAATTGTG CAAGCATCGGCAAGGAATTTATGGTATTAAAAATAATAAAATAACTCTTTTAACTAACACTCAAAATACTATTGAAGTTT TAATACGCGACATTTATTCAGCTCGTAACAATATTGAAATGGTATTTTATATTTGGAAACCAGGAGGTATTGCTGATGAT GTAGCCATGGCTTTAATAGATTCCGCTAAACGTGGAGTACACTGTAGGCTTATGTTAGATTCAGCAGGAAGTGTAGAATT TTTTAGAAGTCCTTGGTTTGACATTATGAAAAAATCTGGAATCGAAATTGTAGAAGCATTAAAAGTTAGTTTAATAAGAA TTTTTTTGAGGCGTTTAGATGTAAGACAACACAGAAAAATTATACTAATTGATAATTATATTTCTTATTCTGGAAGTATG AATCTTGTAGATCCATACTTATTTAAACAATCCTCAGGTGTAGGTCAATGGATTGATTTAATGACAAGAATAGAAGGTCC TGTAGCTACAGCTATAGGTATAATTTATTCATGTGATTGGGAAATTGAAACAGGTTTTAAAATTTTACCTAAATTACCAA ATAAAGAAATGCTAAAAAAAAAATGCAACCAAAACTCTAGTATTCAAGTAATTGCATCAGGTCCAGGATTTCCTAAAAAT GTAATTCATCAAGCGTTATTAACTGCTATTTATTCAGCACGAAATGAATTAATTATGACAACTCCATATCTTGTACCTAG TGATGATTTACTACATGCTATTTGTACTGCTGCTCAAAGAGGTGTAAAAGTTAGCATTATCATACCTTTGTACCATGATT CTATTTTAGTTAAATGGGCAAGTAGAGTATTTTTTAGTGAATTATTAGAAGCAGGAGTAAAAATATATCAATTTAAAAAA GGATTATTACATAGTAAGAGTATACTAATTGATCAACAACTTAGTTTGATTGGTACTGTAAATTTAGACATGAGAAGCTT ATGGTTAAATTTCGAAATTACCTTAGTAATTGACGATAGGAAATTTAGCCATCATTTATCTGCTATACAAAAAGAATATA TTGATAATTCTCGATTATTAGATAAAAATACTTGGTCTATGCGCGCATATTGGACTAGAATTTTAGAAAAAATTTTTTAT TTTTTAAGTCCGTTATTATAA
Upstream 100 bases:
>100_bases AACAGACTATTAGTTAATTTTTCATATTTAAATAGTTAAAAAATATTTAATTTAATATAAAATAATTTTATAAAAAGGTA TGAATAGGACCTTCAAATGA
Downstream 100 bases:
>100_bases TTTAAAAAAAACTTTTAGGGGGTTCATTAAAAAACCCCTGATATTTAAAAAAAAATAAAAAATATTTAAAACTCTTCATA CTGCATAAATGAAAATTTTT
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MDIFYDLIKWLVVLIYWLLIANITYRILIKRRSIPSSMSWLLTIYIIPFIGIAIWFFFGELYLGKRQKKIAKKIWSISNT YLNKLKSYKYIFQIKNSEVATSLFQLCKHRQGIYGIKNNKITLLTNTQNTIEVLIRDIYSARNNIEMVFYIWKPGGIADD VAMALIDSAKRGVHCRLMLDSAGSVEFFRSPWFDIMKKSGIEIVEALKVSLIRIFLRRLDVRQHRKIILIDNYISYSGSM NLVDPYLFKQSSGVGQWIDLMTRIEGPVATAIGIIYSCDWEIETGFKILPKLPNKEMLKKKCNQNSSIQVIASGPGFPKN VIHQALLTAIYSARNELIMTTPYLVPSDDLLHAICTAAQRGVKVSIIIPLYHDSILVKWASRVFFSELLEAGVKIYQFKK GLLHSKSILIDQQLSLIGTVNLDMRSLWLNFEITLVIDDRKFSHHLSAIQKEYIDNSRLLDKNTWSMRAYWTRILEKIFY FLSPLL
Sequences:
>Translated_486_residues MDIFYDLIKWLVVLIYWLLIANITYRILIKRRSIPSSMSWLLTIYIIPFIGIAIWFFFGELYLGKRQKKIAKKIWSISNT YLNKLKSYKYIFQIKNSEVATSLFQLCKHRQGIYGIKNNKITLLTNTQNTIEVLIRDIYSARNNIEMVFYIWKPGGIADD VAMALIDSAKRGVHCRLMLDSAGSVEFFRSPWFDIMKKSGIEIVEALKVSLIRIFLRRLDVRQHRKIILIDNYISYSGSM NLVDPYLFKQSSGVGQWIDLMTRIEGPVATAIGIIYSCDWEIETGFKILPKLPNKEMLKKKCNQNSSIQVIASGPGFPKN VIHQALLTAIYSARNELIMTTPYLVPSDDLLHAICTAAQRGVKVSIIIPLYHDSILVKWASRVFFSELLEAGVKIYQFKK GLLHSKSILIDQQLSLIGTVNLDMRSLWLNFEITLVIDDRKFSHHLSAIQKEYIDNSRLLDKNTWSMRAYWTRILEKIFY FLSPLL >Mature_486_residues MDIFYDLIKWLVVLIYWLLIANITYRILIKRRSIPSSMSWLLTIYIIPFIGIAIWFFFGELYLGKRQKKIAKKIWSISNT YLNKLKSYKYIFQIKNSEVATSLFQLCKHRQGIYGIKNNKITLLTNTQNTIEVLIRDIYSARNNIEMVFYIWKPGGIADD VAMALIDSAKRGVHCRLMLDSAGSVEFFRSPWFDIMKKSGIEIVEALKVSLIRIFLRRLDVRQHRKIILIDNYISYSGSM NLVDPYLFKQSSGVGQWIDLMTRIEGPVATAIGIIYSCDWEIETGFKILPKLPNKEMLKKKCNQNSSIQVIASGPGFPKN VIHQALLTAIYSARNELIMTTPYLVPSDDLLHAICTAAQRGVKVSIIIPLYHDSILVKWASRVFFSELLEAGVKIYQFKK GLLHSKSILIDQQLSLIGTVNLDMRSLWLNFEITLVIDDRKFSHHLSAIQKEYIDNSRLLDKNTWSMRAYWTRILEKIFY FLSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains
Homologues:
Organism=Escherichia coli, GI1787502, Length=486, Percent_Identity=63.3744855967078, Blast_Score=677, Evalue=0.0, Organism=Escherichia coli, GI1787007, Length=379, Percent_Identity=27.4406332453826, Blast_Score=125, Evalue=8e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CLS_BUCAP (Q8K9P9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660609.1 - ProteinModelPortal: Q8K9P9 - EnsemblBacteria: EBBUCT00000000440 - GeneID: 1005464 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg262 - GeneTree: EBGT00050000007948 - HOGENOM: HBG694312 - OMA: LIANITY - ProtClustDB: PRK01642 - BioCyc: BAPH198804:BUSG262-MONOMER - HAMAP: MF_00190 - InterPro: IPR022924 - InterPro: IPR001736 - SMART: SM00155
Pfam domain/function: NA
EC number: 2.7.8.-
Molecular weight: Translated: 56293; Mature: 56293
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50035 PLD
Important sites: ACT_SITE 224-224 ACT_SITE 226-226 ACT_SITE 231-231 ACT_SITE 404-404 ACT_SITE 406-406 ACT_SITE 411-411
Signals:
None
Transmembrane regions:
HASH(0xc5e8fd4)-; HASH(0xc531930)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFYDLIKWLVVLIYWLLIANITYRILIKRRSIPSSMSWLLTIYIIPFIGIAIWFFFGE CCHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLGKRQKKIAKKIWSISNTYLNKLKSYKYIFQIKNSEVATSLFQLCKHRQGIYGIKNNK HHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEECCCE ITLLTNTQNTIEVLIRDIYSARNNIEMVFYIWKPGGIADDVAMALIDSAKRGVHCRLMLD EEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEC SAGSVEFFRSPWFDIMKKSGIEIVEALKVSLIRIFLRRLDVRQHRKIILIDNYISYSGSM CCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHCCEEEEEECEECCCCCC NLVDPYLFKQSSGVGQWIDLMTRIEGPVATAIGIIYSCDWEIETGFKILPKLPNKEMLKK CCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCEECCCCEECCCCCCHHHHHH KCNQNSSIQVIASGPGFPKNVIHQALLTAIYSARNELIMTTPYLVPSDDLLHAICTAAQR HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHC GVKVSIIIPLYHDSILVKWASRVFFSELLEAGVKIYQFKKGLLHSKSILIDQQLSLIGTV CCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEHHHHHHEEEE NLDMRSLWLNFEITLVIDDRKFSHHLSAIQKEYIDNSRLLDKNTWSMRAYWTRILEKIFY CCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHH FLSPLL HHCCCH >Mature Secondary Structure MDIFYDLIKWLVVLIYWLLIANITYRILIKRRSIPSSMSWLLTIYIIPFIGIAIWFFFGE CCHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLGKRQKKIAKKIWSISNTYLNKLKSYKYIFQIKNSEVATSLFQLCKHRQGIYGIKNNK HHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEECCCE ITLLTNTQNTIEVLIRDIYSARNNIEMVFYIWKPGGIADDVAMALIDSAKRGVHCRLMLD EEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEC SAGSVEFFRSPWFDIMKKSGIEIVEALKVSLIRIFLRRLDVRQHRKIILIDNYISYSGSM CCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHCCEEEEEECEECCCCCC NLVDPYLFKQSSGVGQWIDLMTRIEGPVATAIGIIYSCDWEIETGFKILPKLPNKEMLKK CCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCEECCCCEECCCCCCHHHHHH KCNQNSSIQVIASGPGFPKNVIHQALLTAIYSARNELIMTTPYLVPSDDLLHAICTAAQR HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHC GVKVSIIIPLYHDSILVKWASRVFFSELLEAGVKIYQFKKGLLHSKSILIDQQLSLIGTV CCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEHHHHHHEEEE NLDMRSLWLNFEITLVIDDRKFSHHLSAIQKEYIDNSRLLDKNTWSMRAYWTRILEKIFY CCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHH FLSPLL HHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12089438