| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is crr
Identifier: 21672353
GI number: 21672353
Start: 68547
End: 69050
Strand: Reverse
Name: crr
Synonym: BUsg060
Alternate gene names: 21672353
Gene position: 69050-68547 (Counterclockwise)
Preceding gene: 21672354
Following gene: 21672352
Centisome position: 10.76
GC content: 25.2
Gene sequence:
>504_bases ATGAGTTTCTTTTCTGGTTTTTTTAATAAAAAAAAATCTAAATATTCAAAAAAAATAGATATTTTAGCACCTTTATCAGG TGATATAATCAATATTGAAGATGTACCAGATGTTGTTTTTTCTAAAAAAATTGTAGGTGATGGAATAGCTATTAATCCTA CAGGAAATAAAATCCTTGCACCAATAAACGGTACAATTGGAAAGATATTAAATAGTATGCATGCTTTTTCAATTATTTCA GAAGAAGGAGTAGAATTATTTGTGCATTTTGGCATTGATACAGTAAAATTAAGGGGAGAAGGTTTTAAACAAATAGCACA AGATAATCAAAAAGTAAAAATAGGAGATACTATAATCTTATTTGATTTAAATTTATTAAAAGAAAAAGCTCGTTCTATCT TAACCCCAGTTGTAATATCCAATATAGAAAAATTTAAAAACATAGAAAAGTCATCAGGTACAATTATTGCTGGAAAAACA ATTATTATGTCTTTATATAATTGA
Upstream 100 bases:
>100_bases ACTACAAAAGAAATTTTAGATTTATTAAATAAATTCATTATTTAAGGATAGATGAAATTTTAAAAAAAATTTAATTTACA GAAGGACTTAGGAGATAAAA
Downstream 100 bases:
>100_bases TTTTTAATATAAAAACGGTGCTATTATTTAGTACCGTTTTAACATCAAGGTGAGAAGTAAAAATGTTTTTTTTTCATAAG ATAGTTATTCCTATTATTAT
Product: PTS system glucose-specific transporter subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSFFSGFFNKKKSKYSKKIDILAPLSGDIINIEDVPDVVFSKKIVGDGIAINPTGNKILAPINGTIGKILNSMHAFSIIS EEGVELFVHFGIDTVKLRGEGFKQIAQDNQKVKIGDTIILFDLNLLKEKARSILTPVVISNIEKFKNIEKSSGTIIAGKT IIMSLYN
Sequences:
>Translated_167_residues MSFFSGFFNKKKSKYSKKIDILAPLSGDIINIEDVPDVVFSKKIVGDGIAINPTGNKILAPINGTIGKILNSMHAFSIIS EEGVELFVHFGIDTVKLRGEGFKQIAQDNQKVKIGDTIILFDLNLLKEKARSILTPVVISNIEKFKNIEKSSGTIIAGKT IIMSLYN >Mature_166_residues SFFSGFFNKKKSKYSKKIDILAPLSGDIINIEDVPDVVFSKKIVGDGIAINPTGNKILAPINGTIGKILNSMHAFSIISE EGVELFVHFGIDTVKLRGEGFKQIAQDNQKVKIGDTIILFDLNLLKEKARSILTPVVISNIEKFKNIEKSSGTIIAGKTI IMSLYN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-1 domain
Homologues:
Organism=Escherichia coli, GI1788757, Length=166, Percent_Identity=62.0481927710843, Blast_Score=207, Evalue=4e-55, Organism=Escherichia coli, GI1786894, Length=142, Percent_Identity=44.3661971830986, Blast_Score=133, Evalue=6e-33, Organism=Escherichia coli, GI1790159, Length=143, Percent_Identity=35.6643356643357, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: 3540 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): PTGA_BUCAP (Q8KA51)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660420.1 - ProteinModelPortal: Q8KA51 - SMR: Q8KA51 - EnsemblBacteria: EBBUCT00000000319 - GeneID: 1005876 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg060 - GeneTree: EBGT00050000008103 - HOGENOM: HBG517865 - OMA: RRLISGQ - ProtClustDB: PRK09439 - BioCyc: BAPH198804:BUSG060-MONOMER - GO: GO:0005737 - GO: GO:0016020 - InterPro: IPR011055 - InterPro: IPR001127 - TIGRFAMs: TIGR00830
Pfam domain/function: PF00358 PTS_EIIA_1; SSF51261 Dup_hybrid_motif
EC number: 2.7.1.69
Molecular weight: Translated: 18329; Mature: 18198
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS51093 PTS_EIIA_TYPE_1; PS00371 PTS_EIIA_TYPE_1_HIS
Important sites: ACT_SITE 89-89
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFSGFFNKKKSKYSKKIDILAPLSGDIINIEDVPDVVFSKKIVGDGIAINPTGNKILA CCHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCHHHHHHHHCCCCEEECCCCCEEEE PINGTIGKILNSMHAFSIISEEGVELFVHFGIDTVKLRGEGFKQIAQDNQKVKIGDTIIL ECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCHHHHHCCCCEEEECCEEEE FDLNLLKEKARSILTPVVISNIEKFKNIEKSSGTIIAGKTIIMSLYN EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECC >Mature Secondary Structure SFFSGFFNKKKSKYSKKIDILAPLSGDIINIEDVPDVVFSKKIVGDGIAINPTGNKILA CHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCHHHHHHHHCCCCEEECCCCCEEEE PINGTIGKILNSMHAFSIISEEGVELFVHFGIDTVKLRGEGFKQIAQDNQKVKIGDTIIL ECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCHHHHHCCCCEEEECCEEEE FDLNLLKEKARSILTPVVISNIEKFKNIEKSSGTIIAGKTIIMSLYN EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438