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The map label for this gene is secE

Identifier: 21672334

GI number: 21672334

Start: 47894

End: 48277

Strand: Reverse

Name: secE

Synonym: BUsg041

Alternate gene names: 21672334

Gene position: 48277-47894 (Counterclockwise)

Preceding gene: 21672335

Following gene: 21672333

Centisome position: 7.53

GC content: 23.18

Gene sequence:

>384_bases
ATGAAAATTCGCATTCCTGATCAAAAAAAAGCTAAAAATTTAGAAAAAATAAAGTGGTTTTTTATAACTGCAATTTTTAT
CACATCTTTTTTTATCAATAATTTTTTTGATAAAATAGGATATTTTACTCGCATATCTATAATTACTTTATTAGTTGTTT
TTGCAATTAGCATTGCACTATATACCAAAAAAGTAAAGAATGTTTTTGTATATATCAATGCATCAAAAAACGAAATGAAA
AAAATAACTTGGCCTCAATATAAAGAGACTTTGTATACTACATTCATCATTATATCTGTAACAATATTAATATCTCTACT
TTTATGGGGCCTTGATAGTATCATATTTCGTTTAATAGCATTTATTATTAGTGTAAGGTTTTAA

Upstream 100 bases:

>100_bases
TAGAGAAAAGAATAAAAAAAGAGAACTTTTGAAAATAGTTTTTCTACTAACATATTTTTTCTATATTATTGTTCTGTTTT
TATAATCTTTAAGAGAAACT

Downstream 100 bases:

>100_bases
AAAAATGCATGAAAGTCTAAAAAAAAAATGGTATGTATTACAGGCTTTTTCTGGTTTTGAAAGTAGAGTAGCACAATCAA
TAAAAGAGCATGTTAAATTA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKIRIPDQKKAKNLEKIKWFFITAIFITSFFINNFFDKIGYFTRISIITLLVVFAISIALYTKKVKNVFVYINASKNEMK
KITWPQYKETLYTTFIIISVTILISLLLWGLDSIIFRLIAFIISVRF

Sequences:

>Translated_127_residues
MKIRIPDQKKAKNLEKIKWFFITAIFITSFFINNFFDKIGYFTRISIITLLVVFAISIALYTKKVKNVFVYINASKNEMK
KITWPQYKETLYTTFIIISVTILISLLLWGLDSIIFRLIAFIISVRF
>Mature_127_residues
MKIRIPDQKKAKNLEKIKWFFITAIFITSFFINNFFDKIGYFTRISIITLLVVFAISIALYTKKVKNVFVYINASKNEMK
KITWPQYKETLYTTFIIISVTILISLLLWGLDSIIFRLIAFIISVRF

Specific function: Essential for protein export

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

Organism=Escherichia coli, GI1790413, Length=127, Percent_Identity=33.8582677165354, Blast_Score=89, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_BUCAP (Q8KA64)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660401.1
- EnsemblBacteria:   EBBUCT00000000386
- GeneID:   1005857
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg041
- GeneTree:   EBGT00050000007937
- HOGENOM:   HBG701403
- OMA:   ETLYTTF
- ProtClustDB:   PRK05740
- BioCyc:   BAPH198804:BUSG041-MONOMER
- InterPro:   IPR001901
- InterPro:   IPR005807
- PRINTS:   PR01650
- TIGRFAMs:   TIGR00964

Pfam domain/function: PF00584 SecE

EC number: NA

Molecular weight: Translated: 15018; Mature: 15018

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb872d14)-; HASH(0x96d0a0c)-; HASH(0x95cef68)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRIPDQKKAKNLEKIKWFFITAIFITSFFINNFFDKIGYFTRISIITLLVVFAISIAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTKKVKNVFVYINASKNEMKKITWPQYKETLYTTFIIISVTILISLLLWGLDSIIFRLIA
HHHHHHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIISVRF
HHHHHCH
>Mature Secondary Structure
MKIRIPDQKKAKNLEKIKWFFITAIFITSFFINNFFDKIGYFTRISIITLLVVFAISIAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTKKVKNVFVYINASKNEMKKITWPQYKETLYTTFIIISVTILISLLLWGLDSIIFRLIA
HHHHHHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIISVRF
HHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438