| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693230
Identifier: 213693230
GI number: 213693230
Start: 2658408
End: 2660111
Strand: Direct
Name: 213693230
Synonym: Blon_2383
Alternate gene names: NA
Gene position: 2658408-2660111 (Clockwise)
Preceding gene: 213693229
Following gene: 213693235
Centisome position: 93.85
GC content: 45.19
Gene sequence:
>1704_bases ATGTATAGCCCCTATGGAGAAAAGAAAGCGACAATGAATCAGCTGAAAGCATTAAAGAGAATCGAGCCACGGATCTTAGT TCCACTGACTCTTGGCATAATGTTCGCCCTAGGGGATGAATCTTCCAACCCCAAAGGCTACATCATGCAGGGCAGAGAAT CATTGATTGTAAAAATAGTGGTCTTCTGCGTCTTGTTCTGTGCATTGTTCCGAACCATGGACATTCTTATTCACAGAATA TACGCCGCAAAAGATAGGTCGTGTGAGAGACATTGTTCAGGGTTCTTCGAGTATGGCTACGCCATAAAACCATGGCTGAA AAATGCGGCAATAATCGCTACATGTTGGCTGCCATATGAATTTTGGCTGTTTCCTGGTGTATATTGGTCGGACACTTCGA AACAACTTCTTATTCATTACGGGGCAGAACGATTCACTGACCACCACCCCTTCACCTTAACATACATCGTTGGCTGGTTC GCTGATTTCGGCCAACAAGTTTTTCACAATCCAATTTATGGATTATATTTATTGATTGCCATACAGCTTATTGCCGCACC ATTAGTTTTCTCTTGGATGCTTCTGTATACAAGGAAGATGGGCATTCCGCAATGGTTATGCCACGTGGAATTGGCATTCT TCGCATTGTTCCCATTCTTCCCGGTGATGTTCTCTTCACTAGCAAAAGACACTATTTCCGTACTGTTTTTCATCCCCTTC TGCATACTGTTCATTGATGGTATTCGCACCAAGGGCACGTCTCTGGTGAGGCCGGGAACTATCATCGCACTGACATTATG CGGTTTGTTGACTTGTCTGACAAAGAAGGCAGGCATGTATGTGATAATCCCATCAATGCTGCTGATGTTTCTGATTGCAG GAGTATCAAAGAAAGCAAAGACCATTGCATTCGCCATTGGAACCGCGATTGCTGTTGTCATGATAATCATCATTCCTAAA ACCGTCATGCCGACACTCGGCATCGCCCCGGGAGGTAAGCAGGAAACCATACCGTTTGCTATTCAGCAGGTTGCACACGA TGTTAAGTATAATAATAAGGACATCACACCCCAAGAAAGAAAACTAATTTCTGATTTTTTAACCATCGATTACAAGAGTA TTCCCACTGCATACGATCCGCAGATTGCTGATCCAATAAAGGGAACCAGTCTAAGGAATCCCGAACTCTTCAATGATTTC ATTAAGTTGTGGCTTAAGAAGACTGCGGAACATCCAATTGGTCATCTTGAAGCATGGATGGGGCTGGTACATGGTTGGTT CAGCTTCTCCAACAATGATGGTTCGCCAAACGATATGGTGGTTTGCACTGAATCCGCATGGTATTACGAACCTATTCTGA AATATGTTCCGCAATGGCCACTGAAGGCGAACAGAAGCGATACCGCACGTTCCGTGTACAACATGGAACAGAGTCTGCCT ATATTAAATGCCCTGTTCTCCCGTGCGTTATGGGCATCTATTCTGCCATGCTTCATGCTGTACCTAGCCTTACGGCGCGG TAAAGGCAAATGGAGCCGTGTGGCTTCAATGCTTCCAGTAGATATGTCATTCGCCTACCTACTGTTGGTGCCCACGTCCG GCATGGGCGGGGAGCCAACACGATATGTGCTACAGCTAATCTGTATCGCGCCATTATTCCTTGCATTTATGAGCACGACG ACCAAGTCTGACACAATCAGGTAA
Upstream 100 bases:
>100_bases TACATTATTGTGCGCATGTGTATTTGCTGCATGCCTTGCAACGTCCGCACTACTCCGGAATATTCCATATATCGGACGGT TGTTTACTTTGTGAACAAGC
Downstream 100 bases:
>100_bases TCAACAATAAGAGGTGGGACTGCAATCCCACCTCTTATTGTCATTGTTCAGGCTCGCCTTGTTCCAGCAGGGACAATGAA ATACAGAGGAACAATGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MYSPYGEKKATMNQLKALKRIEPRILVPLTLGIMFALGDESSNPKGYIMQGRESLIVKIVVFCVLFCALFRTMDILIHRI YAAKDRSCERHCSGFFEYGYAIKPWLKNAAIIATCWLPYEFWLFPGVYWSDTSKQLLIHYGAERFTDHHPFTLTYIVGWF ADFGQQVFHNPIYGLYLLIAIQLIAAPLVFSWMLLYTRKMGIPQWLCHVELAFFALFPFFPVMFSSLAKDTISVLFFIPF CILFIDGIRTKGTSLVRPGTIIALTLCGLLTCLTKKAGMYVIIPSMLLMFLIAGVSKKAKTIAFAIGTAIAVVMIIIIPK TVMPTLGIAPGGKQETIPFAIQQVAHDVKYNNKDITPQERKLISDFLTIDYKSIPTAYDPQIADPIKGTSLRNPELFNDF IKLWLKKTAEHPIGHLEAWMGLVHGWFSFSNNDGSPNDMVVCTESAWYYEPILKYVPQWPLKANRSDTARSVYNMEQSLP ILNALFSRALWASILPCFMLYLALRRGKGKWSRVASMLPVDMSFAYLLLVPTSGMGGEPTRYVLQLICIAPLFLAFMSTT TKSDTIR
Sequences:
>Translated_567_residues MYSPYGEKKATMNQLKALKRIEPRILVPLTLGIMFALGDESSNPKGYIMQGRESLIVKIVVFCVLFCALFRTMDILIHRI YAAKDRSCERHCSGFFEYGYAIKPWLKNAAIIATCWLPYEFWLFPGVYWSDTSKQLLIHYGAERFTDHHPFTLTYIVGWF ADFGQQVFHNPIYGLYLLIAIQLIAAPLVFSWMLLYTRKMGIPQWLCHVELAFFALFPFFPVMFSSLAKDTISVLFFIPF CILFIDGIRTKGTSLVRPGTIIALTLCGLLTCLTKKAGMYVIIPSMLLMFLIAGVSKKAKTIAFAIGTAIAVVMIIIIPK TVMPTLGIAPGGKQETIPFAIQQVAHDVKYNNKDITPQERKLISDFLTIDYKSIPTAYDPQIADPIKGTSLRNPELFNDF IKLWLKKTAEHPIGHLEAWMGLVHGWFSFSNNDGSPNDMVVCTESAWYYEPILKYVPQWPLKANRSDTARSVYNMEQSLP ILNALFSRALWASILPCFMLYLALRRGKGKWSRVASMLPVDMSFAYLLLVPTSGMGGEPTRYVLQLICIAPLFLAFMSTT TKSDTIR >Mature_567_residues MYSPYGEKKATMNQLKALKRIEPRILVPLTLGIMFALGDESSNPKGYIMQGRESLIVKIVVFCVLFCALFRTMDILIHRI YAAKDRSCERHCSGFFEYGYAIKPWLKNAAIIATCWLPYEFWLFPGVYWSDTSKQLLIHYGAERFTDHHPFTLTYIVGWF ADFGQQVFHNPIYGLYLLIAIQLIAAPLVFSWMLLYTRKMGIPQWLCHVELAFFALFPFFPVMFSSLAKDTISVLFFIPF CILFIDGIRTKGTSLVRPGTIIALTLCGLLTCLTKKAGMYVIIPSMLLMFLIAGVSKKAKTIAFAIGTAIAVVMIIIIPK TVMPTLGIAPGGKQETIPFAIQQVAHDVKYNNKDITPQERKLISDFLTIDYKSIPTAYDPQIADPIKGTSLRNPELFNDF IKLWLKKTAEHPIGHLEAWMGLVHGWFSFSNNDGSPNDMVVCTESAWYYEPILKYVPQWPLKANRSDTARSVYNMEQSLP ILNALFSRALWASILPCFMLYLALRRGKGKWSRVASMLPVDMSFAYLLLVPTSGMGGEPTRYVLQLICIAPLFLAFMSTT TKSDTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64189; Mature: 64189
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPYGEKKATMNQLKALKRIEPRILVPLTLGIMFALGDESSNPKGYIMQGRESLIVKIV CCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHEECCCCCCCCCEEECCHHHHHHHHH VFCVLFCALFRTMDILIHRIYAAKDRSCERHCSGFFEYGYAIKPWLKNAAIIATCWLPYE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHH FWLFPGVYWSDTSKQLLIHYGAERFTDHHPFTLTYIVGWFADFGQQVFHNPIYGLYLLIA HHHCCCEEECCCCCHHHHEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IQLIAAPLVFSWMLLYTRKMGIPQWLCHVELAFFALFPFFPVMFSSLAKDTISVLFFIPF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CILFIDGIRTKGTSLVRPGTIIALTLCGLLTCLTKKAGMYVIIPSMLLMFLIAGVSKKAK HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHH TIAFAIGTAIAVVMIIIIPKTVMPTLGIAPGGKQETIPFAIQQVAHDVKYNNKDITPQER HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH KLISDFLTIDYKSIPTAYDPQIADPIKGTSLRNPELFNDFIKLWLKKTAEHPIGHLEAWM HHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GLVHGWFSFSNNDGSPNDMVVCTESAWYYEPILKYVPQWPLKANRSDTARSVYNMEQSLP HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH ILNALFSRALWASILPCFMLYLALRRGKGKWSRVASMLPVDMSFAYLLLVPTSGMGGEPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCEEEEEEEECCCCCCCHH RYVLQLICIAPLFLAFMSTTTKSDTIR HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYSPYGEKKATMNQLKALKRIEPRILVPLTLGIMFALGDESSNPKGYIMQGRESLIVKIV CCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHEECCCCCCCCCEEECCHHHHHHHHH VFCVLFCALFRTMDILIHRIYAAKDRSCERHCSGFFEYGYAIKPWLKNAAIIATCWLPYE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHH FWLFPGVYWSDTSKQLLIHYGAERFTDHHPFTLTYIVGWFADFGQQVFHNPIYGLYLLIA HHHCCCEEECCCCCHHHHEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IQLIAAPLVFSWMLLYTRKMGIPQWLCHVELAFFALFPFFPVMFSSLAKDTISVLFFIPF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CILFIDGIRTKGTSLVRPGTIIALTLCGLLTCLTKKAGMYVIIPSMLLMFLIAGVSKKAK HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHH TIAFAIGTAIAVVMIIIIPKTVMPTLGIAPGGKQETIPFAIQQVAHDVKYNNKDITPQER HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH KLISDFLTIDYKSIPTAYDPQIADPIKGTSLRNPELFNDFIKLWLKKTAEHPIGHLEAWM HHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GLVHGWFSFSNNDGSPNDMVVCTESAWYYEPILKYVPQWPLKANRSDTARSVYNMEQSLP HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH ILNALFSRALWASILPCFMLYLALRRGKGKWSRVASMLPVDMSFAYLLLVPTSGMGGEPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCEEEEEEEECCCCCCCHH RYVLQLICIAPLFLAFMSTTTKSDTIR HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA