| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693180
Identifier: 213693180
GI number: 213693180
Start: 2592745
End: 2593419
Strand: Direct
Name: 213693180
Synonym: Blon_2330
Alternate gene names: NA
Gene position: 2592745-2593419 (Clockwise)
Preceding gene: 213693179
Following gene: 213693184
Centisome position: 91.53
GC content: 64.44
Gene sequence:
>675_bases ATGGGTTCTTCACGCCCCTCGCGCCCGGCTCAGCTCGACCCGGCTGTGGCCGATGGATTGGCAGGTGGCATGGACCCGCA GGCGTTGAGCGAGATGAGCCATCTGTCCGCTGCCGCATTGCTGGATCGTGTGCGCCATAGCGAGGACCCGGCGGTTGTTG AGCGGGTGCTCACGTTGGTGGAGACGGTCGGTGTGGATGAAATCGCCGAACTGTGGAGCGATGCTGAGCCGGATTCGCTG CCTGGTGTGCTGTGGCGACTGTATATGCTGCGTACGTGGATGCGATCGAATCGCGACTCAATCGCGCATCTGTGGCGCTT GGGCGAGCCGGTGGCCACTACCGCCTCCGCCATCGCCGGCGTGGATCAGGCTCCCAGTGAAGATGACATCGTGCGATTGG CCGATTCGATTCTCTCCGGTGCTTTTGTGGGCGATTTTGCCGTGGCGCTTGAACGTGCGGCGGCGTTTACCGATGTGGTG GCGTTGGGCTTGCGCATGGAGGCGCGGCGCATGGTGACCCGGGCCGAGGCCAACGGCGCCTTCTCCTCGGATGCCGATGA AAAGGCGGTGCGCACCAAAGCCGCCCGCCTTATGCACACCGCCGGCAGCCTCATGGCCACCGCCAAGGATTTCCAGCACG GCGCCAACCTCTGGCGTCGCGGACGGTTGGAGTAA
Upstream 100 bases:
>100_bases TGCCGCCGCGGCTCATGCCGCGCACAATGGTGCCGCCGGCAGTCTGGGCCCAGGCTTCGGCTCGCTGCGTGCGGCCGGAG CGGCATTCGGACCTGCTCGC
Downstream 100 bases:
>100_bases ATCCTGCTCCGGGCTCCCTCTGATGAGAGAGCTGTCACGGGCGATGCCCGTGACTGAGGGAGAGACTCACCAACCGCACC CCAACAATCAGCTACCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGSSRPSRPAQLDPAVADGLAGGMDPQALSEMSHLSAAALLDRVRHSEDPAVVERVLTLVETVGVDEIAELWSDAEPDSL PGVLWRLYMLRTWMRSNRDSIAHLWRLGEPVATTASAIAGVDQAPSEDDIVRLADSILSGAFVGDFAVALERAAAFTDVV ALGLRMEARRMVTRAEANGAFSSDADEKAVRTKAARLMHTAGSLMATAKDFQHGANLWRRGRLE
Sequences:
>Translated_224_residues MGSSRPSRPAQLDPAVADGLAGGMDPQALSEMSHLSAAALLDRVRHSEDPAVVERVLTLVETVGVDEIAELWSDAEPDSL PGVLWRLYMLRTWMRSNRDSIAHLWRLGEPVATTASAIAGVDQAPSEDDIVRLADSILSGAFVGDFAVALERAAAFTDVV ALGLRMEARRMVTRAEANGAFSSDADEKAVRTKAARLMHTAGSLMATAKDFQHGANLWRRGRLE >Mature_223_residues GSSRPSRPAQLDPAVADGLAGGMDPQALSEMSHLSAAALLDRVRHSEDPAVVERVLTLVETVGVDEIAELWSDAEPDSLP GVLWRLYMLRTWMRSNRDSIAHLWRLGEPVATTASAIAGVDQAPSEDDIVRLADSILSGAFVGDFAVALERAAAFTDVVA LGLRMEARRMVTRAEANGAFSSDADEKAVRTKAARLMHTAGSLMATAKDFQHGANLWRRGRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24118; Mature: 23986
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSRPSRPAQLDPAVADGLAGGMDPQALSEMSHLSAAALLDRVRHSEDPAVVERVLTLV CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ETVGVDEIAELWSDAEPDSLPGVLWRLYMLRTWMRSNRDSIAHLWRLGEPVATTASAIAG HHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHC VDQAPSEDDIVRLADSILSGAFVGDFAVALERAAAFTDVVALGLRMEARRMVTRAEANGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FSSDADEKAVRTKAARLMHTAGSLMATAKDFQHGANLWRRGRLE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GSSRPSRPAQLDPAVADGLAGGMDPQALSEMSHLSAAALLDRVRHSEDPAVVERVLTLV CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ETVGVDEIAELWSDAEPDSLPGVLWRLYMLRTWMRSNRDSIAHLWRLGEPVATTASAIAG HHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHC VDQAPSEDDIVRLADSILSGAFVGDFAVALERAAAFTDVVALGLRMEARRMVTRAEANGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FSSDADEKAVRTKAARLMHTAGSLMATAKDFQHGANLWRRGRLE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA