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The map label for this gene is IS1086 [H]

Identifier: 213693129

GI number: 213693129

Start: 2515416

End: 2516174

Strand: Direct

Name: IS1086 [H]

Synonym: Blon_2279

Alternate gene names: 213693129

Gene position: 2515416-2516174 (Clockwise)

Preceding gene: 213693128

Following gene: 213693137

Centisome position: 88.8

GC content: 70.36

Gene sequence:

>759_bases
GTGGCCGAATGGCTGCGTCGCGGCTGGTCGCCGCTGCTCATCAGCGGCAGGCTGCGCGTCCTGTTCCCCGACGACTCCGC
CATGCGCGTGTGCCCGGAGACCGTCTACCGTTGGATCCACGCCGACCGCCATCGCCGTGAACGCTGGGCGCGCCGCCTTC
CACGCGGCCACGGGAGGCGGCGCAGGCGTGGCGGCAGGAGGACGTCGCGTTTCCCGATTCCCGGACGGGTTCCCATCTCC
GAGCGTCCGCCGGAGGCCGGCGACCGCAGCGGTTTCGGCCATCGGGAGGCCGACGGCGTGATCGGCGCCGGATGCAACCC
GCACACCGAGGTCGAGAGGAAGACCAGGTTCCTCATGGCCGGGATCGTGCCCGGCAAGACCGCCGGGGAAAGCGTCGGGG
CGCGGCTGGCGATGTTCTCGCCGCTGCCGGCCGGCGCGCGCGGCGGCGTCACGCACGACAACGGCACCGAATTCGCCCGC
CACACGCGCCTGCGCGACGGGCCGGGCATGGACACGTGCTTCGCCGACCCGTACTCCAGCCGGCGGCGGGGAAGCAACGA
GAACAGGAACGGCATGATCCGCCGGTATCCGCCCAAACGCAGCGAAATCCGGATGGACATGGCCGGGGAACTGCGGGAGA
TTGTCGACGAGGCCGACAACCGTCCCATGCGCGTGCCGGACTACCGGACGCCCGCCGAGGCATTCGCCGACGAACTGCTG
GAATTACAGGACCAACAGGGGTGTTGCACCTCTAAATAG

Upstream 100 bases:

>100_bases
CGGATGCTACATCGCCGGCCCCGCGCGGCGCAAGGCCGACCGCAGGCGCGCCGAACCGCGCAGGCGCTACCGCCTGTCAC
GCGAACGCCTGTGGGCGCGG

Downstream 100 bases:

>100_bases
ACATCGGGCACACGGTTTGCGCGGTGGTGAGCAGTGAGTGGTGAGTATTGAGCAACGTACGGCGACTCACGTACGCTCAC
ACAGTGGTGAGCAATCCGCC

Product: Integrase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAEWLRRGWSPLLISGRLRVLFPDDSAMRVCPETVYRWIHADRHRRERWARRLPRGHGRRRRRGGRRTSRFPIPGRVPIS
ERPPEAGDRSGFGHREADGVIGAGCNPHTEVERKTRFLMAGIVPGKTAGESVGARLAMFSPLPAGARGGVTHDNGTEFAR
HTRLRDGPGMDTCFADPYSSRRRGSNENRNGMIRRYPPKRSEIRMDMAGELREIVDEADNRPMRVPDYRTPAEAFADELL
ELQDQQGCCTSK

Sequences:

>Translated_252_residues
MAEWLRRGWSPLLISGRLRVLFPDDSAMRVCPETVYRWIHADRHRRERWARRLPRGHGRRRRRGGRRTSRFPIPGRVPIS
ERPPEAGDRSGFGHREADGVIGAGCNPHTEVERKTRFLMAGIVPGKTAGESVGARLAMFSPLPAGARGGVTHDNGTEFAR
HTRLRDGPGMDTCFADPYSSRRRGSNENRNGMIRRYPPKRSEIRMDMAGELREIVDEADNRPMRVPDYRTPAEAFADELL
ELQDQQGCCTSK
>Mature_251_residues
AEWLRRGWSPLLISGRLRVLFPDDSAMRVCPETVYRWIHADRHRRERWARRLPRGHGRRRRRGGRRTSRFPIPGRVPISE
RPPEAGDRSGFGHREADGVIGAGCNPHTEVERKTRFLMAGIVPGKTAGESVGARLAMFSPLPAGARGGVTHDNGTEFARH
TRLRDGPGMDTCFADPYSSRRRGSNENRNGMIRRYPPKRSEIRMDMAGELREIVDEADNRPMRVPDYRTPAEAFADELLE
LQDQQGCCTSK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=243, Percent_Identity=34.9794238683128, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790736, Length=243, Percent_Identity=34.9794238683128, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787671, Length=243, Percent_Identity=34.9794238683128, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28596; Mature: 28465

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEWLRRGWSPLLISGRLRVLFPDDSAMRVCPETVYRWIHADRHRRERWARRLPRGHGRR
CCHHHHCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RRRGGRRTSRFPIPGRVPISERPPEAGDRSGFGHREADGVIGAGCNPHTEVERKTRFLMA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
GIVPGKTAGESVGARLAMFSPLPAGARGGVTHDNGTEFARHTRLRDGPGMDTCFADPYSS
CCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
RRRGSNENRNGMIRRYPPKRSEIRMDMAGELREIVDEADNRPMRVPDYRTPAEAFADELL
HHCCCCCCCCCCEEECCCCHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
ELQDQQGCCTSK
HHHCCCCCCCCC
>Mature Secondary Structure 
AEWLRRGWSPLLISGRLRVLFPDDSAMRVCPETVYRWIHADRHRRERWARRLPRGHGRR
CHHHHCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RRRGGRRTSRFPIPGRVPISERPPEAGDRSGFGHREADGVIGAGCNPHTEVERKTRFLMA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
GIVPGKTAGESVGARLAMFSPLPAGARGGVTHDNGTEFARHTRLRDGPGMDTCFADPYSS
CCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
RRRGSNENRNGMIRRYPPKRSEIRMDMAGELREIVDEADNRPMRVPDYRTPAEAFADELL
HHCCCCCCCCCCEEECCCCHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
ELQDQQGCCTSK
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]