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The map label for this gene is apl [H]

Identifier: 213692982

GI number: 213692982

Start: 2353165

End: 2353875

Strand: Reverse

Name: apl [H]

Synonym: Blon_2129

Alternate gene names: 213692982

Gene position: 2353875-2353165 (Counterclockwise)

Preceding gene: 213692987

Following gene: 213692981

Centisome position: 83.1

GC content: 61.18

Gene sequence:

>711_bases
ATGAGTTTTTCCATGGCAGCCGCCACCATTCTTGCGACCGACCCTACGCCCATCTGCACCACCACCGAACCCGGCCTGAT
CGGCACCATCACCGACTGGCTGATCATGCTGATGGAAACCATCGGCGGTATCGGCGTGGCCTTGGCCATCGCCCTCGAAT
CCATCTTCCCGCCCATCCCGTCCGAAGTCATTCTTCCGCTCGCCGGCTTCACCGCCGCACGCGGCACCTTGAGTCTGCCG
GGCGCAATCATCTGGGCCACCATCGGCTCCGTACTGGGTGCCTGGACCTTGTACGGCATCTCCCGCTGGGTGGGCCTGCA
TCGCATCAATCTCGCGGCAGACAGAATCCCCGGCGTCAGCCGCAAAGACGTGAGCAAAGCCAACGACTGGTTCACCAAAT
ACGGCACATGGTCGGTGCTCATCGGCCGTGTGATTCCCGTGGTACGCTCGCTGATTTCGATTCCCGCCGGGTTCAACCGC
ATGAACTTCCTGCACTTCACCGGCTGGACCCTGCTCGGCTCGGCCGTGTGGAACACCATCCTCGTTTCCGCCGGTTATCT
ACTCGGCGACCAGTGGTGCTCGATTCAGGGCGCGCTCGGCGTGTTCGAGGACGTGGTCATCGCGGCCGTGATTGTGGTCA
TCGTATGGTTCGTGGTGCGAAAAGTGCGTACTGTGATACGTAACAGGAAATCCGCCGACGGCAACGAATAG

Upstream 100 bases:

>100_bases
GCCGGGCTCCCAACTTCGCTCTCGGCGGACTTGTCAATAAAATGCACATCTTCTTGCGTCATGCTCCTGATTCTGGGAAA
ACCTTGGGACAATGCCCTCT

Downstream 100 bases:

>100_bases
GGTCTGCCGACTGCCATAAGTTGCCGAAAATCCCGGATAGAAGGGAAGCGAAGAACCCGCATGAGCGACACCGAAGATCT
CGCCGCGCTGAACGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSFSMAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIPSEVILPLAGFTAARGTLSLP
GAIIWATIGSVLGAWTLYGISRWVGLHRINLAADRIPGVSRKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNR
MNFLHFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVVIVWFVVRKVRTVIRNRKSADGNE

Sequences:

>Translated_236_residues
MSFSMAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIPSEVILPLAGFTAARGTLSLP
GAIIWATIGSVLGAWTLYGISRWVGLHRINLAADRIPGVSRKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNR
MNFLHFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVVIVWFVVRKVRTVIRNRKSADGNE
>Mature_235_residues
SFSMAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIPSEVILPLAGFTAARGTLSLPG
AIIWATIGSVLGAWTLYGISRWVGLHRINLAADRIPGVSRKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNRM
NFLHFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVVIVWFVVRKVRTVIRNRKSADGNE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=132, Percent_Identity=30.3030303030303, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788656, Length=135, Percent_Identity=25.1851851851852, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25364; Mature: 25233

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSMAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIP
CCCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
SEVILPLAGFTAARGTLSLPGAIIWATIGSVLGAWTLYGISRWVGLHRINLAADRIPGVS
HHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLHFTGWTLLGSAVWNTI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVVIVWFVVRKVRTVIRNRKSADGNE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFSMAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIP
CCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
SEVILPLAGFTAARGTLSLPGAIIWATIGSVLGAWTLYGISRWVGLHRINLAADRIPGVS
HHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLHFTGWTLLGSAVWNTI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVVIVWFVVRKVRTVIRNRKSADGNE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]