| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692910
Identifier: 213692910
GI number: 213692910
Start: 2264194
End: 2265558
Strand: Reverse
Name: 213692910
Synonym: Blon_2054
Alternate gene names: NA
Gene position: 2265558-2264194 (Counterclockwise)
Preceding gene: 213692911
Following gene: 213692909
Centisome position: 79.98
GC content: 63.0
Gene sequence:
>1365_bases ATGCTGAACATCATGGAGGTCCACGAGACCAATCAGATGATCGAGCAGGAGAAGCTCGACGTCCGCACCATCACCATGGG CATCTCGTTGCTCGACTGCGCCTCGGACGATGTCGACAAGACCTGCGACAACATCTACCGCAAGATCACTACCTATGCCA AGGACCTCGTTTCCACCGGCAAGGCCATCGAACGCGACTACGGCATCCCGATCGTCAACAAGCGCATCACCGTCACCCCG ATCTCGCTGGTCGGTGCCAGCTCCTGCAAGACGAGCGAGGACTTCGTCAAGATCGCCCACGCGCTTGACAAGGCAGCCAA GGAAGTCGGCGTCGACCTGATCGGCGGCTACTCCGCACTCGTCTCCAAGTCCATGACCCCGGCCGAGGAGTTGCTCATCC GCTCCCTGCCGCAAGCCCTTTCCGAGACCGACATCGTCTGCTCGTCCGTGAACGTCGGCTCCACCAAGACCGGCATCGAC ATGAACGCGGTCGAACTGCTCGGCCACATCATCAAGGACGTTGCCGAGCGCACCGCCGACAACGACTCCTACGGCTGCGT CAAGTTCGTGGCCTTCTGCAACGTGCCTGACGACAACCCGTTCATGGCCGGCGGCTTCCACGGCGTCACCGAAGGCGACG CGGTCATCAACGTCGGCGTCTCCGGCCCCGGCGTGGTCTCCCGCGCGCTCGATGCGGCCAAGGGCAAGGACTTCGAATTC CTGTGCGAGACCATCAAGCGCACCGCGTTCAAGATCACGCGCGTGGGTCAGCTTGTGGCTCAGGAGGCTTCCCGCCGCCT CGGCATCCCGTTCGGCATCATCGACCTGTCGCTCGCCCCGACCCCGGCCGTGGGCGACTCCGTGGGTGAAGTGCTGGAGA AGATCGGCCTCGAACAGGTTGGCGCACCGGGCACTACCGCGGCGCTCGCCATGCTCAACGACCAGGTGAAGAAGGGCGGC ATTATGGCGTCCTCCTACGTGGGCGGCTTGTCCGGCGCGTTCATCCCGGTCTCCGAAGACAAGAACATGATCGACGCGGC TTCTTCCGGTTGCCTGACCCTCGAGAAGCTTGAGGCCATGACCTGCGTATGCTCGGTGGGCCTCGACATGATCGCCATTC CGGGCGATACCTCTGCTTCCACCATCTCCGGCCTGATCGCCGACGAAGCCGCCATCGGCATGGTCAACCAGAAGACCACC GCCGTGCGCGTGATTCCGGTGGAAGGCAAAGGCGTAGGGGAGATGGCCAACTTCGGCGGCCTGATGGGCTATGCGCCGAT CATTCCGGTGAACCAGACCAGCTGCGAGGCTTTCGTGACCCGTGGCGGCCGAATCCCTGCGCCGATTCACAGCTTCAAGA ACTGA
Upstream 100 bases:
>100_bases GTGGAAAGCCCGGTGGGCTTTCCGCTGACGGAGCCATCCTTATCCCTCTGATGAGGGTGACCGCCAAACTAGTCTTCAAA TATCCTGTAAGGAACAAACC
Downstream 100 bases:
>100_bases TTCGGTAGGGTATCTGCTTTCAGAGAGGTACATTTGCGCAGATAGGTATCTGCTTTCAGAGAGGTACCTCAATCAAGAAA CCCCGAGTACGAGCGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN
Sequences:
>Translated_454_residues MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN >Mature_454_residues MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007841 [H]
Pfam domain/function: PF05167 DUF711 [H]
EC number: NA
Molecular weight: Translated: 47588; Mature: 47588
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTG CCCEEHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC KAIERDYGIPIVNKRITVTPISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSAL HHHHHCCCCCEECCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHH VSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGIDMNAVELLGHIIKDVAERTAD HHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC NDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF CCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHC GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAM CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCHHHHCCCCCEEHHHHHHH TCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHCCC LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN CCCCCCEECCCCCHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTG CCCEEHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC KAIERDYGIPIVNKRITVTPISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSAL HHHHHCCCCCEECCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHH VSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGIDMNAVELLGHIIKDVAERTAD HHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC NDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF CCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHC GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAM CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCHHHHCCCCCEEHHHHHHH TCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHCCC LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN CCCCCCEECCCCCHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]