Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692910

Identifier: 213692910

GI number: 213692910

Start: 2264194

End: 2265558

Strand: Reverse

Name: 213692910

Synonym: Blon_2054

Alternate gene names: NA

Gene position: 2265558-2264194 (Counterclockwise)

Preceding gene: 213692911

Following gene: 213692909

Centisome position: 79.98

GC content: 63.0

Gene sequence:

>1365_bases
ATGCTGAACATCATGGAGGTCCACGAGACCAATCAGATGATCGAGCAGGAGAAGCTCGACGTCCGCACCATCACCATGGG
CATCTCGTTGCTCGACTGCGCCTCGGACGATGTCGACAAGACCTGCGACAACATCTACCGCAAGATCACTACCTATGCCA
AGGACCTCGTTTCCACCGGCAAGGCCATCGAACGCGACTACGGCATCCCGATCGTCAACAAGCGCATCACCGTCACCCCG
ATCTCGCTGGTCGGTGCCAGCTCCTGCAAGACGAGCGAGGACTTCGTCAAGATCGCCCACGCGCTTGACAAGGCAGCCAA
GGAAGTCGGCGTCGACCTGATCGGCGGCTACTCCGCACTCGTCTCCAAGTCCATGACCCCGGCCGAGGAGTTGCTCATCC
GCTCCCTGCCGCAAGCCCTTTCCGAGACCGACATCGTCTGCTCGTCCGTGAACGTCGGCTCCACCAAGACCGGCATCGAC
ATGAACGCGGTCGAACTGCTCGGCCACATCATCAAGGACGTTGCCGAGCGCACCGCCGACAACGACTCCTACGGCTGCGT
CAAGTTCGTGGCCTTCTGCAACGTGCCTGACGACAACCCGTTCATGGCCGGCGGCTTCCACGGCGTCACCGAAGGCGACG
CGGTCATCAACGTCGGCGTCTCCGGCCCCGGCGTGGTCTCCCGCGCGCTCGATGCGGCCAAGGGCAAGGACTTCGAATTC
CTGTGCGAGACCATCAAGCGCACCGCGTTCAAGATCACGCGCGTGGGTCAGCTTGTGGCTCAGGAGGCTTCCCGCCGCCT
CGGCATCCCGTTCGGCATCATCGACCTGTCGCTCGCCCCGACCCCGGCCGTGGGCGACTCCGTGGGTGAAGTGCTGGAGA
AGATCGGCCTCGAACAGGTTGGCGCACCGGGCACTACCGCGGCGCTCGCCATGCTCAACGACCAGGTGAAGAAGGGCGGC
ATTATGGCGTCCTCCTACGTGGGCGGCTTGTCCGGCGCGTTCATCCCGGTCTCCGAAGACAAGAACATGATCGACGCGGC
TTCTTCCGGTTGCCTGACCCTCGAGAAGCTTGAGGCCATGACCTGCGTATGCTCGGTGGGCCTCGACATGATCGCCATTC
CGGGCGATACCTCTGCTTCCACCATCTCCGGCCTGATCGCCGACGAAGCCGCCATCGGCATGGTCAACCAGAAGACCACC
GCCGTGCGCGTGATTCCGGTGGAAGGCAAAGGCGTAGGGGAGATGGCCAACTTCGGCGGCCTGATGGGCTATGCGCCGAT
CATTCCGGTGAACCAGACCAGCTGCGAGGCTTTCGTGACCCGTGGCGGCCGAATCCCTGCGCCGATTCACAGCTTCAAGA
ACTGA

Upstream 100 bases:

>100_bases
GTGGAAAGCCCGGTGGGCTTTCCGCTGACGGAGCCATCCTTATCCCTCTGATGAGGGTGACCGCCAAACTAGTCTTCAAA
TATCCTGTAAGGAACAAACC

Downstream 100 bases:

>100_bases
TTCGGTAGGGTATCTGCTTTCAGAGAGGTACATTTGCGCAGATAGGTATCTGCTTTCAGAGAGGTACCTCAATCAAGAAA
CCCCGAGTACGAGCGTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP
ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID
MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF
LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG
IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT
AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN

Sequences:

>Translated_454_residues
MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP
ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID
MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF
LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG
IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT
AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN
>Mature_454_residues
MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTGKAIERDYGIPIVNKRITVTP
ISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSALVSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGID
MNAVELLGHIIKDVAERTADNDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF
LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQVGAPGTTAALAMLNDQVKKGG
IMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAMTCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTT
AVRVIPVEGKGVGEMANFGGLMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007841 [H]

Pfam domain/function: PF05167 DUF711 [H]

EC number: NA

Molecular weight: Translated: 47588; Mature: 47588

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTG
CCCEEHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KAIERDYGIPIVNKRITVTPISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSAL
HHHHHCCCCCEECCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
VSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGIDMNAVELLGHIIKDVAERTAD
HHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF
CCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH
LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHC
GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAM
CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCHHHHCCCCCEEHHHHHHH
TCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHCCC
LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN
CCCCCCEECCCCCHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MLNIMEVHETNQMIEQEKLDVRTITMGISLLDCASDDVDKTCDNIYRKITTYAKDLVSTG
CCCEEHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KAIERDYGIPIVNKRITVTPISLVGASSCKTSEDFVKIAHALDKAAKEVGVDLIGGYSAL
HHHHHCCCCCEECCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
VSKSMTPAEELLIRSLPQALSETDIVCSSVNVGSTKTGIDMNAVELLGHIIKDVAERTAD
HHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAKGKDFEF
CCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHH
LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHC
GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAASSGCLTLEKLEAM
CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCHHHHCCCCCEEHHHHHHH
TCVCSVGLDMIAIPGDTSASTISGLIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHCCC
LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN
CCCCCCEECCCCCHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]