Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is artQ [H]

Identifier: 213692816

GI number: 213692816

Start: 2136814

End: 2137701

Strand: Direct

Name: artQ [H]

Synonym: Blon_1956

Alternate gene names: 213692816

Gene position: 2136814-2137701 (Clockwise)

Preceding gene: 213692815

Following gene: 213692817

Centisome position: 75.43

GC content: 57.77

Gene sequence:

>888_bases
ATGACCGCAGCACCAACCGAAACCAGGCAGCACAATGCCCCTGACGGACACGAGGTAAGTCAGGTCGAGCTCAGACGACG
CCAATATCGTGTTCATCAGCAAATTCAATCGACGATTACCAGTCTGATCAGCACCATTGTGTTCGTTGTGGTCATCGTCA
TCGGCCTGAAGCTCTCCCCCGGCTGGCCACGAGTCAAGGAGACCTTCTTCTCCGGCGAATACTTCGTCAAATCGTTTCCC
CATGTGCTTGACGGCCTATGGCTCAACATCCGCGTTCTGCTCGTCGCAGTGGTCGGCGTGGCGATTCTAAGCACGCTGAT
CGCATTGGTGCGCACCAGCCGCTCCCCTATTCTGTTCCCGCTGCGTATCCTGGCATTGATCTACACGACTGTGATGCGCG
GCGTGCCTATTATCGTCGTGCTGTATCTAATCGGTTTCGGCATTCCCGGCCTAGGCTTGTTCGGCCGTATCGATCCCTCG
GTACTCGGCACCATTGCAGTGGTAATGGGATACAGCGCCTACGTCTCCGAGGTGCTGCGTGCCGGTTTTAACGACGTACA
TCCTTCTCAGCGAGCCTCGGCCCGCTCGTTGGGCCTGACCTCCGGCCAGACGACCCGACTGATCGTCATTCCTCAGGCAT
TGCGCAAAGTCGCGCCCGCACTGATGAATGACTTCATCTCCATGCAAAAGGACGTCGGCCTGATTTCCGTGCTGGGTGCG
GTGGATGCCGTGCGCGCCGCACAGATCGACGTGGCCAGCACCTACAACTTCACGCCGTATGTGGTCGCCAGCCTGCTGTT
CATCCTGATGAGCGTGCCGTTCATCCTGCTGAACGACTGGTACACGGAACGTCTGCGTAAACGCGAACTCAGCGGAGGAA
CGGTATGA

Upstream 100 bases:

>100_bases
GCTCACATCATAAGGTCACAACACCTTGGCCGGACGCTGCGGAAATTTTCCTGTGACACCCGGCCATTCCGGCATTCAGG
AAGCGAGCGACATTCATCAC

Downstream 100 bases:

>100_bases
GCGGAATAACCAATATCAACACCGAGGCGAGTGACTCCCCCGTGAGCAACAAGACGGTGCTGCGTCTTGATGACGTGCGC
AAATCCTTTGGAAACACGCA

Product: polar amino acid ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFP
HVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPS
VLGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA
VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV

Sequences:

>Translated_295_residues
MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFP
HVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPS
VLGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA
VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV
>Mature_294_residues
TAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFPH
VLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSV
LGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAV
DAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV

Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=32.093023255814, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082239, Length=215, Percent_Identity=33.953488372093, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786873, Length=185, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787030, Length=178, Percent_Identity=27.5280898876405, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788646, Length=155, Percent_Identity=32.258064516129, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787087, Length=182, Percent_Identity=28.021978021978, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32385; Mature: 32254

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GWPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFP
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLR
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA
CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GWPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFP
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLR
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA
CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]