| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is artQ [H]
Identifier: 213692816
GI number: 213692816
Start: 2136814
End: 2137701
Strand: Direct
Name: artQ [H]
Synonym: Blon_1956
Alternate gene names: 213692816
Gene position: 2136814-2137701 (Clockwise)
Preceding gene: 213692815
Following gene: 213692817
Centisome position: 75.43
GC content: 57.77
Gene sequence:
>888_bases ATGACCGCAGCACCAACCGAAACCAGGCAGCACAATGCCCCTGACGGACACGAGGTAAGTCAGGTCGAGCTCAGACGACG CCAATATCGTGTTCATCAGCAAATTCAATCGACGATTACCAGTCTGATCAGCACCATTGTGTTCGTTGTGGTCATCGTCA TCGGCCTGAAGCTCTCCCCCGGCTGGCCACGAGTCAAGGAGACCTTCTTCTCCGGCGAATACTTCGTCAAATCGTTTCCC CATGTGCTTGACGGCCTATGGCTCAACATCCGCGTTCTGCTCGTCGCAGTGGTCGGCGTGGCGATTCTAAGCACGCTGAT CGCATTGGTGCGCACCAGCCGCTCCCCTATTCTGTTCCCGCTGCGTATCCTGGCATTGATCTACACGACTGTGATGCGCG GCGTGCCTATTATCGTCGTGCTGTATCTAATCGGTTTCGGCATTCCCGGCCTAGGCTTGTTCGGCCGTATCGATCCCTCG GTACTCGGCACCATTGCAGTGGTAATGGGATACAGCGCCTACGTCTCCGAGGTGCTGCGTGCCGGTTTTAACGACGTACA TCCTTCTCAGCGAGCCTCGGCCCGCTCGTTGGGCCTGACCTCCGGCCAGACGACCCGACTGATCGTCATTCCTCAGGCAT TGCGCAAAGTCGCGCCCGCACTGATGAATGACTTCATCTCCATGCAAAAGGACGTCGGCCTGATTTCCGTGCTGGGTGCG GTGGATGCCGTGCGCGCCGCACAGATCGACGTGGCCAGCACCTACAACTTCACGCCGTATGTGGTCGCCAGCCTGCTGTT CATCCTGATGAGCGTGCCGTTCATCCTGCTGAACGACTGGTACACGGAACGTCTGCGTAAACGCGAACTCAGCGGAGGAA CGGTATGA
Upstream 100 bases:
>100_bases GCTCACATCATAAGGTCACAACACCTTGGCCGGACGCTGCGGAAATTTTCCTGTGACACCCGGCCATTCCGGCATTCAGG AAGCGAGCGACATTCATCAC
Downstream 100 bases:
>100_bases GCGGAATAACCAATATCAACACCGAGGCGAGTGACTCCCCCGTGAGCAACAAGACGGTGCTGCGTCTTGATGACGTGCGC AAATCCTTTGGAAACACGCA
Product: polar amino acid ABC transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFP HVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPS VLGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV
Sequences:
>Translated_295_residues MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFP HVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPS VLGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV >Mature_294_residues TAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSPGWPRVKETFFSGEYFVKSFPH VLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSV LGTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAV DAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=32.093023255814, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI87082239, Length=215, Percent_Identity=33.953488372093, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786873, Length=185, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787030, Length=178, Percent_Identity=27.5280898876405, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788646, Length=155, Percent_Identity=32.258064516129, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787087, Length=182, Percent_Identity=28.021978021978, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32385; Mature: 32254
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GWPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFP CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLR HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH AGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAAPTETRQHNAPDGHEVSQVELRRRQYRVHQQIQSTITSLISTIVFVVVIVIGLKLSP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GWPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFP CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRILALIYTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLR HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH AGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGA CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VDAVRAAQIDVASTYNFTPYVVASLLFILMSVPFILLNDWYTERLRKRELSGGTV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]