| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692805
Identifier: 213692805
GI number: 213692805
Start: 2125320
End: 2126690
Strand: Direct
Name: 213692805
Synonym: Blon_1943
Alternate gene names: NA
Gene position: 2125320-2126690 (Clockwise)
Preceding gene: 213692804
Following gene: 213692806
Centisome position: 75.03
GC content: 61.34
Gene sequence:
>1371_bases GTGGCAAGACGTACTTGGTACCGACTAGACAACATCGGCAAGTTCTACTCCTCCCAGGCTGGCCGCTCCTCGCAGACCGT GTTCCGCTATTCGGCTGAGCTGGAGGACGACATCGCCCCGGACATCCTGCAGCACGCGCTCGACCATGCCATCGCCCAGT TCCCGAGCTTCAACGTGCACCTGCTCAACGGCATGTTCTGGCATTACCTCGAACAGTCAGATGGCCGGCCGCTGGTGGAG CCGGAACATCTGCCGATATGCTCGCGACTGCATTACGGGCCCAAAAGCATGCTGTTCCGCGTGAGCTATTTCCGCAATCG TGTCAATCTCGAGGTCTCGCACATCATTTCGGACGGTCGCGGCGCCATCAACCTGTTCAAGTCACTGCTGCACGCCTACA TCGCCGAGCGGTACGACGTGCCGGGCGTGCCTTCGGATTATGACGGTTCGGATAGCGACAAAGCCGAAAACAGCTTCGAC AAATACTACGAGAAAGACAAGGCCGGTGCCGCGCCCGGCACGAAGATCTACCGGCTGTCCGGCCCTATCGACCGGGACGC GCCCACGTTCATGGAATATCACGTCAGCGCCAGCAAGATGCTTGGTGCAGCACATCAGTGCGGAGTGAGCCTCACCTCCT ACCTCATCGCCGCGATACTGTGCGCGATTCGCGACGTCATGCCCTCGCGCGCCCGCAATCGCGCGATTCGCGTGGATATT CCGGTCGACTTGCGCGCCTTCTTCAGGTCGGAGACCGTGCGCAACTTCTACGGCATGACTTACGTGGCGTACACGCCGGC CGATATCGAAGCCGATGAGGACTCCGCGAAAACTTCCGCAACGGGCCCAGACGCGACCGGCGACGGCCAGCAGTCCGCCG CCCGCACCGCGCACGGCAACGGTATGGGTGGGTTGCTGACCGATGAGCCGTTGGCCGACATCGCCCGCCATGTGCAGGAG CAGCTCGGCCATGCCACCAGTCGCGAGCGCGTCGAATCGCATATGAACCGCATGATTGCGCTGGAAAAGAATCCGGTGCT GCGTCTCGCGCCCTCCCCTGCCAAGGACTGGGTGCTGGAGCTGGCCCGGTTCATCACCGACCGCGAAACCACGACCACCG TCTCGAACCTTGGCCGAGTCACCTTGGACGAACGACTCGCGCGCCATGTGCGTTCGGTGAGCTTCCTCACTACACCGGCC AGCCTTAATTTCACGGTCTGCTCGTTCGGCGACGACCTGAGCATCGGCATCTCCACCATCTACCATGATCTGAACGTCAT CAAGAACCTGTGTCGGATTCTCGCCACGCAGGGCATCAGCGGCCTTATGAACATCGCTGGCGTGCATGTGGAGAAAGGAG CGTCGGCATGA
Upstream 100 bases:
>100_bases CCACCACCTACCGAATCATCGAGCATTTCCTCGACGGCACACCGCTGGAACCGGCTCCCGGCACCGGCACCACCGCCAAC GCACCGGAGGGAGGCGACGC
Downstream 100 bases:
>100_bases AGCATTGCGATGCCTGCAGCGTCGATTTCACCGGCGATATGGCCCGTTGCCCGCTCTGCCAGAACGAATTGCACGGCGAG GCCTCTCCCGCCGCATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELEDDIAPDILQHALDHAIAQFPSFNVHLLNGMFWHYLEQSDGRPLVE PEHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGRGAINLFKSLLHAYIAERYDVPGVPSDYDGSDSDKAENSFD KYYEKDKAGAAPGTKIYRLSGPIDRDAPTFMEYHVSASKMLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDI PVDLRAFFRSETVRNFYGMTYVAYTPADIEADEDSAKTSATGPDATGDGQQSAARTAHGNGMGGLLTDEPLADIARHVQE QLGHATSRERVESHMNRMIALEKNPVLRLAPSPAKDWVLELARFITDRETTTTVSNLGRVTLDERLARHVRSVSFLTTPA SLNFTVCSFGDDLSIGISTIYHDLNVIKNLCRILATQGISGLMNIAGVHVEKGASA
Sequences:
>Translated_456_residues MARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELEDDIAPDILQHALDHAIAQFPSFNVHLLNGMFWHYLEQSDGRPLVE PEHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGRGAINLFKSLLHAYIAERYDVPGVPSDYDGSDSDKAENSFD KYYEKDKAGAAPGTKIYRLSGPIDRDAPTFMEYHVSASKMLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDI PVDLRAFFRSETVRNFYGMTYVAYTPADIEADEDSAKTSATGPDATGDGQQSAARTAHGNGMGGLLTDEPLADIARHVQE QLGHATSRERVESHMNRMIALEKNPVLRLAPSPAKDWVLELARFITDRETTTTVSNLGRVTLDERLARHVRSVSFLTTPA SLNFTVCSFGDDLSIGISTIYHDLNVIKNLCRILATQGISGLMNIAGVHVEKGASA >Mature_455_residues ARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELEDDIAPDILQHALDHAIAQFPSFNVHLLNGMFWHYLEQSDGRPLVEP EHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGRGAINLFKSLLHAYIAERYDVPGVPSDYDGSDSDKAENSFDK YYEKDKAGAAPGTKIYRLSGPIDRDAPTFMEYHVSASKMLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDIP VDLRAFFRSETVRNFYGMTYVAYTPADIEADEDSAKTSATGPDATGDGQQSAARTAHGNGMGGLLTDEPLADIARHVQEQ LGHATSRERVESHMNRMIALEKNPVLRLAPSPAKDWVLELARFITDRETTTTVSNLGRVTLDERLARHVRSVSFLTTPAS LNFTVCSFGDDLSIGISTIYHDLNVIKNLCRILATQGISGLMNIAGVHVEKGASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50546; Mature: 50414
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELEDDIAPDILQHALDHAIAQFPSFNVH CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE LLNGMFWHYLEQSDGRPLVEPEHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCEEHHHHHCCCC GAINLFKSLLHAYIAERYDVPGVPSDYDGSDSDKAENSFDKYYEKDKAGAAPGTKIYRLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEC GPIDRDAPTFMEYHVSASKMLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC PVDLRAFFRSETVRNFYGMTYVAYTPADIEADEDSAKTSATGPDATGDGQQSAARTAHGN CHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC GMGGLLTDEPLADIARHVQEQLGHATSRERVESHMNRMIALEKNPVLRLAPSPAKDWVLE CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCEEEECCCCHHHHHHH LARFITDRETTTTVSNLGRVTLDERLARHVRSVSFLTTPASLNFTVCSFGDDLSIGISTI HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCHHHHHHH YHDLNVIKNLCRILATQGISGLMNIAGVHVEKGASA HHHHHHHHHHHHHHHHHCHHHHHHHHCCEECCCCCC >Mature Secondary Structure ARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELEDDIAPDILQHALDHAIAQFPSFNVH CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE LLNGMFWHYLEQSDGRPLVEPEHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCEEHHHHHCCCC GAINLFKSLLHAYIAERYDVPGVPSDYDGSDSDKAENSFDKYYEKDKAGAAPGTKIYRLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEC GPIDRDAPTFMEYHVSASKMLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC PVDLRAFFRSETVRNFYGMTYVAYTPADIEADEDSAKTSATGPDATGDGQQSAARTAHGN CHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC GMGGLLTDEPLADIARHVQEQLGHATSRERVESHMNRMIALEKNPVLRLAPSPAKDWVLE CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCEEEECCCCHHHHHHH LARFITDRETTTTVSNLGRVTLDERLARHVRSVSFLTTPASLNFTVCSFGDDLSIGISTI HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCHHHHHHH YHDLNVIKNLCRILATQGISGLMNIAGVHVEKGASA HHHHHHHHHHHHHHHHHCHHHHHHHHCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA