| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692760
Identifier: 213692760
GI number: 213692760
Start: 2067125
End: 2068231
Strand: Reverse
Name: 213692760
Synonym: Blon_1895
Alternate gene names: NA
Gene position: 2068231-2067125 (Counterclockwise)
Preceding gene: 213692761
Following gene: 213692755
Centisome position: 73.01
GC content: 60.79
Gene sequence:
>1107_bases ATGGGGCAGTTCGGTGTCATGATTGGCCAGTTGGTCGGATTCCTGATCATGCTGATGGTCGGATACGGATGTGTAAGGCT CCGGTTCTATGGTCAGACGGCGCTGGACGGCATGTGTTCGCTGCTGCTCAACGTGCTCATCCCTGTGCTCGTGTTCTCGA ACGCCGTCGACGGCGCGGACCGCGCGCAGCTCGCCGCCAACTGGGGCGTGATGCTGCTGACCGCCGTGATGTACGCGCTG CTCATCCTGGTGTTCTGGCTGGTCGCCAAACTGTTGCGGCTCAAAGGTTCGCGTAGCCATGTATTCCAGGCATCGCTTAT TTTCGGCAACGCCGGATTCATCGGCATTCCGTTGATTATGGCACTTTGGCCGCAGAACGGCGCGATTTACGTGGCGCTGA TGTCGATCATCGACCAGACGCTGCTCTGGACGTACGGCGTATGGCTGTGCGAGCCGGTCGTCGAAGCGACTGACGGCAAC GCGATTGGCGCGCGAGGTGCGGTCGCGAACGGTTCGGTGAACGGCGCCGGTTCGGTGGGGGAGGCTGGTTCGGCGAGCAA TGCTGGTTCGGCGAGCAATGCCGCAAACGGTGGTTCTCCGGCCGTCGTCCGCCCCTCGCTAGGTACCCGCGTCCTCGGCC TGCTTAAACGATTCGTCAATCCCGCCTTCATTGGCGTGATGCTCGCCCTGATTCTGATTCTGCTTGGCGTCAAGGTGCCG GACATCATCCTGAAGCCGCTGCACACCATCGGCAATATGGCCACACCGATGTCGCTAATCTACTTGGGCGGCCTGTTCGC ACTGACCAAGTGGTGGGGCGTCCTCAAACGCTACGAACTCTATGCTGGCCTAGTCGCCAAGATGATCGCATTCCCGCTCG CCTTCTACGCGCTACTGACCGCGCTGACCGGCGCATCGCCGCAACTGTCGATCACCCATGACATGGTGCTGATGATCACG GTCATCGCCGGACTGCCGACCATGACCACCATCGCCATGTTCACCGGTCGCAAGAACAACATGCCCGAGTATGCGGTCGG CTTCGTGCTCGTAAGCACGCTGTTCTCGCTGGCCTCCCTGACGATTGTGTCGGCGGTCGTGTTCTGA
Upstream 100 bases:
>100_bases TATCGAACATACTGATGCGTGTGCCGCCGAGCCTGTCCAGATGGCTGCCTATATGAACCAGTGACAGGAAATCGTGGGAG AGCAAACGAGAGGAGTGTGC
Downstream 100 bases:
>100_bases ATTGTCCCCTTCGACGAAAAGAATGCCGGGGGCCTCCGGCGCTTGGAATCTCATTCATAAATAAATGCTGGCTATTCTTT TTACCATGAATCAGGAACCA
Product: Auxin Efflux Carrier
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MGQFGVMIGQLVGFLIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPVLVFSNAVDGADRAQLAANWGVMLLTAVMYAL LILVFWLVAKLLRLKGSRSHVFQASLIFGNAGFIGIPLIMALWPQNGAIYVALMSIIDQTLLWTYGVWLCEPVVEATDGN AIGARGAVANGSVNGAGSVGEAGSASNAGSASNAANGGSPAVVRPSLGTRVLGLLKRFVNPAFIGVMLALILILLGVKVP DIILKPLHTIGNMATPMSLIYLGGLFALTKWWGVLKRYELYAGLVAKMIAFPLAFYALLTALTGASPQLSITHDMVLMIT VIAGLPTMTTIAMFTGRKNNMPEYAVGFVLVSTLFSLASLTIVSAVVF
Sequences:
>Translated_368_residues MGQFGVMIGQLVGFLIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPVLVFSNAVDGADRAQLAANWGVMLLTAVMYAL LILVFWLVAKLLRLKGSRSHVFQASLIFGNAGFIGIPLIMALWPQNGAIYVALMSIIDQTLLWTYGVWLCEPVVEATDGN AIGARGAVANGSVNGAGSVGEAGSASNAGSASNAANGGSPAVVRPSLGTRVLGLLKRFVNPAFIGVMLALILILLGVKVP DIILKPLHTIGNMATPMSLIYLGGLFALTKWWGVLKRYELYAGLVAKMIAFPLAFYALLTALTGASPQLSITHDMVLMIT VIAGLPTMTTIAMFTGRKNNMPEYAVGFVLVSTLFSLASLTIVSAVVF >Mature_367_residues GQFGVMIGQLVGFLIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPVLVFSNAVDGADRAQLAANWGVMLLTAVMYALL ILVFWLVAKLLRLKGSRSHVFQASLIFGNAGFIGIPLIMALWPQNGAIYVALMSIIDQTLLWTYGVWLCEPVVEATDGNA IGARGAVANGSVNGAGSVGEAGSASNAGSASNAANGGSPAVVRPSLGTRVLGLLKRFVNPAFIGVMLALILILLGVKVPD IILKPLHTIGNMATPMSLIYLGGLFALTKWWGVLKRYELYAGLVAKMIAFPLAFYALLTALTGASPQLSITHDMVLMITV IAGLPTMTTIAMFTGRKNNMPEYAVGFVLVSTLFSLASLTIVSAVVF
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38879; Mature: 38748
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQFGVMIGQLVGFLIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPVLVFSNAVDGAD CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH RAQLAANWGVMLLTAVMYALLILVFWLVAKLLRLKGSRSHVFQASLIFGNAGFIGIPLIM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHH ALWPQNGAIYVALMSIIDQTLLWTYGVWLCEPVVEATDGNAIGARGAVANGSVNGAGSVG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC EAGSASNAGSASNAANGGSPAVVRPSLGTRVLGLLKRFVNPAFIGVMLALILILLGVKVP CCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCH DIILKPLHTIGNMATPMSLIYLGGLFALTKWWGVLKRYELYAGLVAKMIAFPLAFYALLT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTGASPQLSITHDMVLMITVIAGLPTMTTIAMFTGRKNNMPEYAVGFVLVSTLFSLASL HHCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TIVSAVVF HHHHHHHC >Mature Secondary Structure GQFGVMIGQLVGFLIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPVLVFSNAVDGAD CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH RAQLAANWGVMLLTAVMYALLILVFWLVAKLLRLKGSRSHVFQASLIFGNAGFIGIPLIM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHH ALWPQNGAIYVALMSIIDQTLLWTYGVWLCEPVVEATDGNAIGARGAVANGSVNGAGSVG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC EAGSASNAGSASNAANGGSPAVVRPSLGTRVLGLLKRFVNPAFIGVMLALILILLGVKVP CCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCH DIILKPLHTIGNMATPMSLIYLGGLFALTKWWGVLKRYELYAGLVAKMIAFPLAFYALLT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTGASPQLSITHDMVLMITVIAGLPTMTTIAMFTGRKNNMPEYAVGFVLVSTLFSLASL HHCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TIVSAVVF HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA