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The map label for this gene is pdtaR [H]

Identifier: 213692611

GI number: 213692611

Start: 1915324

End: 1916109

Strand: Reverse

Name: pdtaR [H]

Synonym: Blon_1744

Alternate gene names: 213692611

Gene position: 1916109-1915324 (Counterclockwise)

Preceding gene: 213692612

Following gene: 213692610

Centisome position: 67.64

GC content: 60.31

Gene sequence:

>786_bases
ATGGCTGCAAGGAAGAAGTCCGAAGAACCGAGTATCAACGTCGATGAGGTGCTGACCGACGAAGAGCTCAAGGCCGTGGC
CGATGAAAGCGAACCTGCTGAGCGCAAGGTCAAGCCCGAGGACGGTCCGCGTACCGTTGTCGTGGCCGAAGACGAAGCCG
TGAACCGCATGGATCTGGTCGCCATGCTGGAAGACAACGGTTATGAGGTCGTTGGTCAGGCCGCCAACGGCGAGGAAGCC
GTGGAACTGACCCGCAAGTACCGCCCCGATGTGGTGTGCATGGATGTCAAGATGCCGCGTATGGACGGCATCGCCGCTGC
CGGCATTATCTGCGATGAGAACATCGCCCCCGTCGTCATGCTCACCGCATTCTCCCAGACCGATCTGGTGAAGAAGGCCA
CCGGCGCCGGCGCCATGGCATACGTCACCAAGCCGTACGAGGAATCCAAGCTGCTGCCGACCCTCGAGGTGGCCATGGGC
CGTTTCGCCGAGATCAACGATTTGCTGGACAACGTGGAGCGCAGCGAACGCAAGCTCAAGGAAACCACCGACCAGCTCAA
GGAAACCGAAGAGAAGCTCAAGAAGGCTGAAGACACGCTTGAGGAGCGCAAGCTCGTCGACCGCGCCAAGGGTCTGCTGA
TGGACAAGGCGGACTTCTCTGAGCAGGGTGCCTTCCGTTGGATTCAGAAGACCTCCATGGACCAGCGCATCCCCAAGAAG
CGCCTGGCTCAGGCCATCATCGCCAAGTACGGCGATCCGAAGCCTTCTGATTCGGGCGAACGCTGA

Upstream 100 bases:

>100_bases
TGCGCAGTGTGGGTTCGAGTCCCACCGAGGGCACTTTAGTTAGGAGTTCGCTGAAATTATTACGAACCCCACTGTTGGGT
AATTCAAGAAAGAGGTTGGC

Downstream 100 bases:

>100_bases
TTATCGGCGTCGCCGTGCTGAGTCGTAAAGTAACACAAACACACTATGGGAGAGGCCAGCGTGACCGTACCCACCAATGA
AACGTTGCTGGTGGTGGACG

Product: response regulator receiver and ANTAR domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAARKKSEEPSINVDEVLTDEELKAVADESEPAERKVKPEDGPRTVVVAEDEAVNRMDLVAMLEDNGYEVVGQAANGEEA
VELTRKYRPDVVCMDVKMPRMDGIAAAGIICDENIAPVVMLTAFSQTDLVKKATGAGAMAYVTKPYEESKLLPTLEVAMG
RFAEINDLLDNVERSERKLKETTDQLKETEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKK
RLAQAIIAKYGDPKPSDSGER

Sequences:

>Translated_261_residues
MAARKKSEEPSINVDEVLTDEELKAVADESEPAERKVKPEDGPRTVVVAEDEAVNRMDLVAMLEDNGYEVVGQAANGEEA
VELTRKYRPDVVCMDVKMPRMDGIAAAGIICDENIAPVVMLTAFSQTDLVKKATGAGAMAYVTKPYEESKLLPTLEVAMG
RFAEINDLLDNVERSERKLKETTDQLKETEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKK
RLAQAIIAKYGDPKPSDSGER
>Mature_260_residues
AARKKSEEPSINVDEVLTDEELKAVADESEPAERKVKPEDGPRTVVVAEDEAVNRMDLVAMLEDNGYEVVGQAANGEEAV
ELTRKYRPDVVCMDVKMPRMDGIAAAGIICDENIAPVVMLTAFSQTDLVKKATGAGAMAYVTKPYEESKLLPTLEVAMGR
FAEINDLLDNVERSERKLKETTDQLKETEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKKR
LAQAIIAKYGDPKPSDSGER

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=111, Percent_Identity=35.1351351351351, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=35.7798165137615, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=35.2459016393443, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 29050; Mature: 28919

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKKSEEPSINVDEVLTDEELKAVADESEPAERKVKPEDGPRTVVVAEDEAVNRMDLV
CCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCHHHEE
AMLEDNGYEVVGQAANGEEAVELTRKYRPDVVCMDVKMPRMDGIAAAGIICDENIAPVVM
EEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCEEECCCCCCEEE
LTAFSQTDLVKKATGAGAMAYVTKPYEESKLLPTLEVAMGRFAEINDLLDNVERSERKLK
EECCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTDQLKETEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCHH
RLAQAIIAKYGDPKPSDSGER
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AARKKSEEPSINVDEVLTDEELKAVADESEPAERKVKPEDGPRTVVVAEDEAVNRMDLV
CCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCCHHHEE
AMLEDNGYEVVGQAANGEEAVELTRKYRPDVVCMDVKMPRMDGIAAAGIICDENIAPVVM
EEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCEEECCCCCCEEE
LTAFSQTDLVKKATGAGAMAYVTKPYEESKLLPTLEVAMGRFAEINDLLDNVERSERKLK
EECCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTDQLKETEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCHH
RLAQAIIAKYGDPKPSDSGER
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]