| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692603
Identifier: 213692603
GI number: 213692603
Start: 1905708
End: 1905974
Strand: Reverse
Name: 213692603
Synonym: Blon_1736
Alternate gene names: NA
Gene position: 1905974-1905708 (Counterclockwise)
Preceding gene: 213692606
Following gene: 213692601
Centisome position: 67.28
GC content: 56.93
Gene sequence:
>267_bases GTGCTCGCGCAACAAGTGCCCTGTGCCATCTGCGACAGGCCGATAGACGACGCGATCGCATGGCTCGATCCAATGAGCGT CGAAGTTGACGAAATCATTCCAGTGAGTCACGGCGGAAGCGCGACTGATCTGCGCAACCTTGAGAAGGTGCATCGCTGCT GCAACCAACTCAAAAGCGACAAAAGCCTTGCATGGGCAAGGCAGAAGGTCAAAGGCTCTCCGGCCCTCAAACCGACCGCC GTCCCGTTCAAGAGTTCGGATTGGTAA
Upstream 100 bases:
>100_bases GGCACCCTTCACTCGTAGGCCGACCAACATGCCCCACGGTAGGAACTACAGGGATCCACGGCGCATCAACCGCTAGGCCC GCAATCTCGCCAGACAGCGG
Downstream 100 bases:
>100_bases CAGGTCTGGGAACGGTATCCTACTGGTCTGGCGTTCGGCTACCCCGAAGTATTGGCCAAATCCCTCCCCGCCGTTTTCCC AAATCAGGATTCGTTGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MLAQQVPCAICDRPIDDAIAWLDPMSVEVDEIIPVSHGGSATDLRNLEKVHRCCNQLKSDKSLAWARQKVKGSPALKPTA VPFKSSDW
Sequences:
>Translated_88_residues MLAQQVPCAICDRPIDDAIAWLDPMSVEVDEIIPVSHGGSATDLRNLEKVHRCCNQLKSDKSLAWARQKVKGSPALKPTA VPFKSSDW >Mature_88_residues MLAQQVPCAICDRPIDDAIAWLDPMSVEVDEIIPVSHGGSATDLRNLEKVHRCCNQLKSDKSLAWARQKVKGSPALKPTA VPFKSSDW
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9685; Mature: 9685
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQQVPCAICDRPIDDAIAWLDPMSVEVDEIIPVSHGGSATDLRNLEKVHRCCNQLKSD CCCCCCCHHHCCCCHHHHHHHCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC KSLAWARQKVKGSPALKPTAVPFKSSDW CHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAQQVPCAICDRPIDDAIAWLDPMSVEVDEIIPVSHGGSATDLRNLEKVHRCCNQLKSD CCCCCCCHHHCCCCHHHHHHHCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC KSLAWARQKVKGSPALKPTAVPFKSSDW CHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA