| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692543
Identifier: 213692543
GI number: 213692543
Start: 1828639
End: 1829910
Strand: Direct
Name: 213692543
Synonym: Blon_1675
Alternate gene names: NA
Gene position: 1828639-1829910 (Clockwise)
Preceding gene: 213692542
Following gene: 213692546
Centisome position: 64.55
GC content: 66.12
Gene sequence:
>1272_bases ATGACGAACGCATACGAATGCACGCCCCAACCACAAAGAAGCCAAGCCGCTGATCCTCTTCGCACACGCGACTTCCGCCT GCTCGTCGCGGGTCTCGGCATATCGCTCTTCGCCAACCTTATGCTGCGGTTTGCCATGTCCATGTGGGTGCTTGACGAGA CCGGCTCGGCGGCGGCGTTCGCCTCCATTCTTACTGCAAGTATCCTGCCCACGATTCTGCTCTCGCCCCTTGGCGGCGTG ATGGCGGATCGTACGAACCGTCGGACCGTCATGGTGGCGCTTGACGCGCTTTCCGCCGTGACGGTGCTCGTCTGCGCGGC GATCTTTTCGGCCGCCGGTTTCAATCTGGCGGCGATAGCCGTGATGCAGGTGGTGCTCGCCGTGCTTGACGCGATGGAGA CGCCTACGGTGCAGGCGGCGCTGCCGCAGATGTTCCGCTCCCATGGCGAGGATGTGATGCGTCGCGCGATGGCCGTGGTG AACGTAGTGAACCAGACGAGCACGCTCGTTCCCGCCGTGCTCGGCGGCGTGCTGTACGCGGCGGTTGGTGCGATGCCCAT GATGGGAATCACGATCGTGGGGTTCGGTGCGGCCGCCGTCGTGGAGTGTTTCATCCAGCTCGGCGCTCCCGACCGCGGCG ACGCCGGCCGCGTCACCGCGGTTGACGACCTGCGCGCGGCCGGACGTTTCCTCACCCGCGAACGTCCTCATGTGCTGCAT CTGGTGTTGATCTGCGCCGCGCTCAACTTCCTGGTGACGGGGTATGCGGAGGTCGGCTTCCCCTACATGGCGCGTACCGT ACTGGGGTTCGGCTCCACGGCGTACGGCATTGCATATGGTCTCGTGGGAGCATCCGGACTGCTCGGCGCGCTCGTCGGTG GGCGGATCGCGAGGTCGCTGTCCATGCGGCGATTCCCGATGGCGATCGCCGCCTTCTCGCTCACCATCCTGCCCCAAGCG CTCGCCATGACGATTCCCGCAGGTGGAGTGATGCGACTCGCGGTGCTCACGGCGAGCACCTGCGGAACCATGATCGCCAT CACCCTCGCGAACCTCATCGCCGTGCCGGCGATCCAGATGGGCTGCCCCGAGAACATGACCGGCAAGGTGATGTCGCTCG CGCTCTCCGCGAGCATGTGCGCCCAGCCCCTCGGACAGATCGCATACGGCTGGGCGTACAGCGTCTACCCGGCGGGCGCG GTCCTGGCGGTGACGTTCGCCCTGGCCACCGCGATGCTGCCGCCAGTCGCGCACGTAACGCGGCGGTTCTAG
Upstream 100 bases:
>100_bases GCTTCCGCGCCCTTTTCCTTGGGCGTATTGTTATCACAATAACAGACCGACGGTCGGTTTGTATAAATGGCCGTGGCCAA TCACAAGAAAGGAATCCACG
Downstream 100 bases:
>100_bases GACGGGATTCCATCACCTTCGCTCTGGACAGCTGAGACATCAAAACCATGTGTGGATACGTGAACGGCCGCCATCAATCA TGGTGATGTTGGCCGTTCAC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Macrolide-Efflux Protein; Permease; ABC Transporter Permease Protein; Transporter Facilitator Family; Amino Acid Adenylation Domain-Containing Protein; Facilitator Superfamily Permease; MFS Family Transporter Protein; Multidrug ABC Transporter Permease; Macrolide-Efflux Determinant; Tetracycline Resistance Determinant TetV; Mfs Transporter; Facilitator Superfamily MacrolideCation Symporter; Efflux Protein; Multidrug Resistance Protein; Macrolide-Efflux Determinant ; Facilitator Superfamily Transporter; ABC Transporter Permease; Facilitator Family Transporter; Multidrug ABC Transporter; Macrolide Efflux Protein; Tetracycline Resistance Determinant Tetv; Facilitator Superfamily MFS Protein; Glucose-Dependent Multidrug Resistance Protein
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTNAYECTPQPQRSQAADPLRTRDFRLLVAGLGISLFANLMLRFAMSMWVLDETGSAAAFASILTASILPTILLSPLGGV MADRTNRRTVMVALDALSAVTVLVCAAIFSAAGFNLAAIAVMQVVLAVLDAMETPTVQAALPQMFRSHGEDVMRRAMAVV NVVNQTSTLVPAVLGGVLYAAVGAMPMMGITIVGFGAAAVVECFIQLGAPDRGDAGRVTAVDDLRAAGRFLTRERPHVLH LVLICAALNFLVTGYAEVGFPYMARTVLGFGSTAYGIAYGLVGASGLLGALVGGRIARSLSMRRFPMAIAAFSLTILPQA LAMTIPAGGVMRLAVLTASTCGTMIAITLANLIAVPAIQMGCPENMTGKVMSLALSASMCAQPLGQIAYGWAYSVYPAGA VLAVTFALATAMLPPVAHVTRRF
Sequences:
>Translated_423_residues MTNAYECTPQPQRSQAADPLRTRDFRLLVAGLGISLFANLMLRFAMSMWVLDETGSAAAFASILTASILPTILLSPLGGV MADRTNRRTVMVALDALSAVTVLVCAAIFSAAGFNLAAIAVMQVVLAVLDAMETPTVQAALPQMFRSHGEDVMRRAMAVV NVVNQTSTLVPAVLGGVLYAAVGAMPMMGITIVGFGAAAVVECFIQLGAPDRGDAGRVTAVDDLRAAGRFLTRERPHVLH LVLICAALNFLVTGYAEVGFPYMARTVLGFGSTAYGIAYGLVGASGLLGALVGGRIARSLSMRRFPMAIAAFSLTILPQA LAMTIPAGGVMRLAVLTASTCGTMIAITLANLIAVPAIQMGCPENMTGKVMSLALSASMCAQPLGQIAYGWAYSVYPAGA VLAVTFALATAMLPPVAHVTRRF >Mature_422_residues TNAYECTPQPQRSQAADPLRTRDFRLLVAGLGISLFANLMLRFAMSMWVLDETGSAAAFASILTASILPTILLSPLGGVM ADRTNRRTVMVALDALSAVTVLVCAAIFSAAGFNLAAIAVMQVVLAVLDAMETPTVQAALPQMFRSHGEDVMRRAMAVVN VVNQTSTLVPAVLGGVLYAAVGAMPMMGITIVGFGAAAVVECFIQLGAPDRGDAGRVTAVDDLRAAGRFLTRERPHVLHL VLICAALNFLVTGYAEVGFPYMARTVLGFGSTAYGIAYGLVGASGLLGALVGGRIARSLSMRRFPMAIAAFSLTILPQAL AMTIPAGGVMRLAVLTASTCGTMIAITLANLIAVPAIQMGCPENMTGKVMSLALSASMCAQPLGQIAYGWAYSVYPAGAV LAVTFALATAMLPPVAHVTRRF
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44035; Mature: 43904
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAYECTPQPQRSQAADPLRTRDFRLLVAGLGISLFANLMLRFAMSMWVLDETGSAAAF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ASILTASILPTILLSPLGGVMADRTNRRTVMVALDALSAVTVLVCAAIFSAAGFNLAAIA HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHH VMQVVLAVLDAMETPTVQAALPQMFRSHGEDVMRRAMAVVNVVNQTSTLVPAVLGGVLYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGAMPMMGITIVGFGAAAVVECFIQLGAPDRGDAGRVTAVDDLRAAGRFLTRERPHVLH HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHH LVLICAALNFLVTGYAEVGFPYMARTVLGFGSTAYGIAYGLVGASGLLGALVGGRIARSL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMRRFPMAIAAFSLTILPQALAMTIPAGGVMRLAVLTASTCGTMIAITLANLIAVPAIQM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GCPENMTGKVMSLALSASMCAQPLGQIAYGWAYSVYPAGAVLAVTFALATAMLPPVAHVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH RRF CCC >Mature Secondary Structure TNAYECTPQPQRSQAADPLRTRDFRLLVAGLGISLFANLMLRFAMSMWVLDETGSAAAF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ASILTASILPTILLSPLGGVMADRTNRRTVMVALDALSAVTVLVCAAIFSAAGFNLAAIA HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHH VMQVVLAVLDAMETPTVQAALPQMFRSHGEDVMRRAMAVVNVVNQTSTLVPAVLGGVLYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGAMPMMGITIVGFGAAAVVECFIQLGAPDRGDAGRVTAVDDLRAAGRFLTRERPHVLH HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHH LVLICAALNFLVTGYAEVGFPYMARTVLGFGSTAYGIAYGLVGASGLLGALVGGRIARSL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMRRFPMAIAAFSLTILPQALAMTIPAGGVMRLAVLTASTCGTMIAITLANLIAVPAIQM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GCPENMTGKVMSLALSASMCAQPLGQIAYGWAYSVYPAGAVLAVTFALATAMLPPVAHVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH RRF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA