| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692500
Identifier: 213692500
GI number: 213692500
Start: 1780445
End: 1781884
Strand: Reverse
Name: 213692500
Synonym: Blon_1629
Alternate gene names: NA
Gene position: 1781884-1780445 (Counterclockwise)
Preceding gene: 213692501
Following gene: 213692496
Centisome position: 62.9
GC content: 60.28
Gene sequence:
>1440_bases ATGAACACCTGTAAAGCCACATTGCGTGTACTGTTCTCGCACAGGGCCTACCTGTTGATTTACCTCGTGTTCGTGGGCAT CATGATGCTGTCTATCAGCTGGTCGATGCTGTCTGGCACATCCGATTCCGCAGCCGCGGCATTCGAGCCGGCCAAAATGC GTGTCGCCGTCATCGATCGAGACTCGGACAGGGGCGGCATCGCGTCATCGATGCGCACATACCTGTCGGATTCCAGCGAA CTGGTGAACGTTGACGATGCTAGTGAAACTCTGCAACAAGCCGTCGCCTCGAACTGGGTGGATCTGATCGTCATCATCCC CGATGGTTTCGCCGACGATTTCATTGATGCCGCGGCGACAGGCGAGAATCCACCAAGCGTGGACACGGTCACCAGCTATA CGTCCGGCGCAGGCTCGATGGCCCGGATGAACGTCATCGGGTTCCTTTCACTCACGCGTACGGCACTGATTGGCTCGCAT ACGACGGTCGATAGTGCGGCGCTCGCAGCTATGGCCGGCATCGACATTGGAGACACTGCGGGTGATTCGTCTGAAGATGG CATGGGCGGGTTTGGTGAATTCTCGAATCAGGACATGCTTGATAGGCTGCCGGCCGGTCAGATTGAGAAACCCAGCGTCG GCGATCTGTTCGAGGCATCGAAAGCGGCTGCCGCATCGGCGAGTGACATGGACGCGAACCATAAGGTCGCTGTGATCGAC ACGGCAAGCGCGGACGCGGAAAGTGCTTCGGACATGGCGGCCAGCGGATTCGGCAACACCATGAAAACCGCGCTGCATCC GCTGTTTTTGGCGATGACCGTCTGCGGATCAATGATTCTGGGCACATTCACCACCGGGGAAGTTCGCCGTCGTCTCACCG CATCCCCACAACGCATGTCGTCGATGGGACTCCAGCGGTTGCTGACGCTCAGCGGATTCGCGCTCGTCGTATGCGTCGGT TATCTGGTGCTGGCTGTCGGTCTGATGGTCGCGGCAGGACTTGATCCGTTGACATTGAGCGCCGAAGGAGTGCTGATGAC GTTCTGCGCAACCTGCGTATATGCGCTGATGACCGTCGCCTGTGGATTCATGCTCAGCGAATTCGGGTTTTCGGAGGCGG CTGCCAACGGATTCGCCAATATCTTCGGCCTGCTCATCATGTTCACGTCGGGAGTTGCGTTGCCGGTTGACATGATGCCC GGCGTGATGGTGACCATAGCCAAGTTCCTGCCCGGCTGGTGGTATTGCACCGCGATCGACAACGCGCTCGGCTCCGGCAC GGCGGAGGAAACCGGCATAAGCGTCGCCGGCTGGGCCGGCTCGCTGGGATTGGTCGCACTGTTCGGCGTGATGTTCATCT GTATCGGTCTGGCCGCCGGCCGGTTCCGCCGCTCCCGCCCCGCCCTGGCCGCGCCCGCCACCACGCAGCTGGCCGAGTGA
Upstream 100 bases:
>100_bases TACGACAGCTACCAGCCGTTCATCACCACTTGTGCCATTTTGCTGGCGATGAGCGCGGTATTCCTCTTGGCTGGCATCGC AATGCTGAGGAGGCAACGCT
Downstream 100 bases:
>100_bases GAAATCAGCCTTTCAACCGATACCGCTGCACCGGGTCATCGGCGAACTTGACTCGGGCGACCCGCCCTTCCTTCATCAGC TCGCGCATACCGGATGTGGC
Product: ABC-2 type transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDRDSDRGGIASSMRTYLSDSSE LVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAATGENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSH TTVDSAALAAMAGIDIGDTAGDSSEDGMGGFGEFSNQDMLDRLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID TASADAESASDMAASGFGNTMKTALHPLFLAMTVCGSMILGTFTTGEVRRRLTASPQRMSSMGLQRLLTLSGFALVVCVG YLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVACGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMP GVMVTIAKFLPGWWYCTAIDNALGSGTAEETGISVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPALAAPATTQLAE
Sequences:
>Translated_479_residues MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDRDSDRGGIASSMRTYLSDSSE LVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAATGENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSH TTVDSAALAAMAGIDIGDTAGDSSEDGMGGFGEFSNQDMLDRLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID TASADAESASDMAASGFGNTMKTALHPLFLAMTVCGSMILGTFTTGEVRRRLTASPQRMSSMGLQRLLTLSGFALVVCVG YLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVACGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMP GVMVTIAKFLPGWWYCTAIDNALGSGTAEETGISVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPALAAPATTQLAE >Mature_479_residues MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDRDSDRGGIASSMRTYLSDSSE LVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAATGENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSH TTVDSAALAAMAGIDIGDTAGDSSEDGMGGFGEFSNQDMLDRLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID TASADAESASDMAASGFGNTMKTALHPLFLAMTVCGSMILGTFTTGEVRRRLTASPQRMSSMGLQRLLTLSGFALVVCVG YLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVACGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMP GVMVTIAKFLPGWWYCTAIDNALGSGTAEETGISVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPALAAPATTQLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49711; Mature: 49711
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEC DSDRGGIASSMRTYLSDSSELVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAAT CCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCC GENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSHTTVDSAALAAMAGIDIGDTA CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC GDSSEDGMGGFGEFSNQDMLDRLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE TASADAESASDMAASGFGNTMKTALHPLFLAMTVCGSMILGTFTTGEVRRRLTASPQRMS CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH SMGLQRLLTLSGFALVVCVGYLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH CGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMPGVMVTIAKFLPGWWYCTAID HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEEHHHH NALGSGTAEETGISVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPALAAPATTQLAE HHHCCCCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC >Mature Secondary Structure MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEC DSDRGGIASSMRTYLSDSSELVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAAT CCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCC GENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSHTTVDSAALAAMAGIDIGDTA CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC GDSSEDGMGGFGEFSNQDMLDRLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE TASADAESASDMAASGFGNTMKTALHPLFLAMTVCGSMILGTFTTGEVRRRLTASPQRMS CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH SMGLQRLLTLSGFALVVCVGYLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH CGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMPGVMVTIAKFLPGWWYCTAID HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEEHHHH NALGSGTAEETGISVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPALAAPATTQLAE HHHCCCCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA