| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692499
Identifier: 213692499
GI number: 213692499
Start: 1778962
End: 1780440
Strand: Direct
Name: 213692499
Synonym: Blon_1628
Alternate gene names: NA
Gene position: 1778962-1780440 (Clockwise)
Preceding gene: 213692498
Following gene: 213692503
Centisome position: 62.8
GC content: 63.22
Gene sequence:
>1479_bases ATGGTCGATGACTATACTGCCAAAATGACTGAGCTGATCGAACTCATGCGTCTGATCGGCAACGATACGCAGCAGTGCGA GGTCAAGGAATGCAAGCGCAAGATCTCCTCGACCATCACCGATACGCTGTCCGCGTTCTCCAACGGCTCCGGCGGCTGGA TCATCCTTGGCCTGTCCGAAAAGAACGGGTTCACGCCGGTCGAGGGATTCGACGCGCGCGCCATGCAGGAGGCGCTGAGC CAGGCGTGCGAGAAGATGACGCCGGTGGTGCGGCCCGTGATCGTCACCTGCCCGTTCGAAGGCACGAATCTGGTGTTCGC GCGCATCGACGAGATGCTGCCGCGCGACAAGCCCTGCTTCACCACCGCGCTCGGACCGCACGGCGGCTCGTTCATCCGCA CCGGCGACGGCGACCGGCGCATGACCTCCTATGAGGTCGACCGGCTCATCGAGGAGCATCTGCAGCCCACGTACGATCTG GATATCGTGCCCGGCGCCACGACCGATGACCTCGACCCGCAGCTTGTTGCCGGATTGTTGGCGCGCGTGCGCGAGCAGCA TCCGCGCGTGTTCGCCGACCGGGACGGCATCGACGTGCTGCTGGATCTGCAGGTGTTGCGCCATGATGATTCCGACGAGT CGGAGGTCGGCGGAATACTGCGTCCCACCTTGGCCGGACTGCTGGCGTTGGGCCGCTATCCGCAGAAGTTCTATCCGCGG CTCGGCATTTCGATAGCCGTGTTTCCGGGGACGAGCCGGGACGATGTGTTCCGGGGCGACGAGCGATTGGTCGCCTCGAA GTCGGTGGTCGGTTCGATTCCGGTGATGATCGACGATGCGGTCGACTCGTTGATGCGTTGGATTGGCGCGAAGAAGCCCG ATTATCCGCCGCTCGTGTTGCGCGAGGCGATTGCGAACGCGCTCACCCACCGTGATTATTCGCCCGATGCGCGCGGCACG CAGGTGCATATCAGCGTGTTCACCAATCGCATCGAGATCACCAATCCGGGCGGTCTGTATGGCATGGTGACACATGATGT GCTGGCGAGTCCGCATCCGGTGACGGGTGCACCGTTCGTCTCCACCCGAAACCAGTTCCTGTTCACGCTGCTGGAGTCCA CGCCGTATCCGGGCGGCGGGTTTGTGAACCCAGAAGGCGGCGACGGCTACCAGCGCATCGCCGCCGCGTTGCGTGAGGCC GGCATCGAGCCGGCGACCACGCGCAACGACATCAACACGTTCACGATGACCATCACCAAGCAGCGCACGATGGCGAACAG TTCGCCGGGCGACGTGGTCAAGGCGATTATGACCGTACTGGAGCGGCATTCGGCGATGAGCGTCAAGGAGATCATGCGCG AACTGCAGTTGACGCCGCTGGCCGCCACATCCGGTATGCGCGAGCTGATGAAGGAAGGGCGGGTCGCCCGAGTCAAGTTC GCCGATGACCCGGTGCAGCGGTATCGGTTGAAAGGCTGA
Upstream 100 bases:
>100_bases ACCAGTAACCCATGAATTCTGGATGAATTGGGGTGAACCGGCGGGGCTGGAGGCGAGCGGGCGGCGGATTATGGGGCACA ATGGTGTCAAGGAGGCCGCC
Downstream 100 bases:
>100_bases TTTCTCACTCGGCCAGCTGCGTGGTGGCGGGCGCGGCCAGGGCGGGGCGGGAGCGGCGGAACCGGCCGGCGGCCAGACCG ATACAGATGAACATCACGCC
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase RecG; AAA-4 Family Protein; Divergent AAA ATP; Divergent AAA Domain Family Protein; Divergent AAA Domain Family; ATP-Dependent DNA Helicase RecG-Related Protein
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MVDDYTAKMTELIELMRLIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSEKNGFTPVEGFDARAMQEALS QACEKMTPVVRPVIVTCPFEGTNLVFARIDEMLPRDKPCFTTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDL DIVPGATTDDLDPQLVAGLLARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVLREAIANALTHRDYSPDARGT QVHISVFTNRIEITNPGGLYGMVTHDVLASPHPVTGAPFVSTRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREA GIEPATTRNDINTFTMTITKQRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF ADDPVQRYRLKG
Sequences:
>Translated_492_residues MVDDYTAKMTELIELMRLIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSEKNGFTPVEGFDARAMQEALS QACEKMTPVVRPVIVTCPFEGTNLVFARIDEMLPRDKPCFTTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDL DIVPGATTDDLDPQLVAGLLARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVLREAIANALTHRDYSPDARGT QVHISVFTNRIEITNPGGLYGMVTHDVLASPHPVTGAPFVSTRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREA GIEPATTRNDINTFTMTITKQRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF ADDPVQRYRLKG >Mature_492_residues MVDDYTAKMTELIELMRLIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSEKNGFTPVEGFDARAMQEALS QACEKMTPVVRPVIVTCPFEGTNLVFARIDEMLPRDKPCFTTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDL DIVPGATTDDLDPQLVAGLLARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVLREAIANALTHRDYSPDARGT QVHISVFTNRIEITNPGGLYGMVTHDVLASPHPVTGAPFVSTRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREA GIEPATTRNDINTFTMTITKQRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF ADDPVQRYRLKG
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54111; Mature: 54111
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDYTAKMTELIELMRLIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSE CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC KNGFTPVEGFDARAMQEALSQACEKMTPVVRPVIVTCPFEGTNLVFARIDEMLPRDKPCF CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCE TTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDLDIVPGATTDDLDPQLVAGLL EEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHH ARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR HHHHHHCCCEEECCCCCEEEEEHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHCCC LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVL CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHH REAIANALTHRDYSPDARGTQVHISVFTNRIEITNPGGLYGMVTHDVLASPHPVTGAPFV HHHHHHHHHCCCCCCCCCCCEEEEEEEECEEEECCCCCEEEHHHHHHHCCCCCCCCCCCH STRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREAGIEPATTRNDINTFTMTITK HCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE QRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEE ADDPVQRYRLKG CCCHHHHHCCCC >Mature Secondary Structure MVDDYTAKMTELIELMRLIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSE CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC KNGFTPVEGFDARAMQEALSQACEKMTPVVRPVIVTCPFEGTNLVFARIDEMLPRDKPCF CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCE TTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDLDIVPGATTDDLDPQLVAGLL EEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHH ARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR HHHHHHCCCEEECCCCCEEEEEHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHCCC LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVL CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHH REAIANALTHRDYSPDARGTQVHISVFTNRIEITNPGGLYGMVTHDVLASPHPVTGAPFV HHHHHHHHHCCCCCCCCCCCEEEEEEEECEEEECCCCCEEEHHHHHHHCCCCCCCCCCCH STRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREAGIEPATTRNDINTFTMTITK HCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE QRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEE ADDPVQRYRLKG CCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA