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The map label for this gene is ycfF [C]

Identifier: 213692456

GI number: 213692456

Start: 1737124

End: 1737462

Strand: Reverse

Name: ycfF [C]

Synonym: Blon_1585

Alternate gene names: 213692456

Gene position: 1737462-1737124 (Counterclockwise)

Preceding gene: 213692457

Following gene: 213692455

Centisome position: 61.33

GC content: 60.47

Gene sequence:

>339_bases
ATGAGCGAATCCGACGATTGCCTGTTCTGCAAGATCATCGCAGGGCAGATTCCCAGCAGCAAGGTCTACGAGGACGAGAC
GACCTACGCATTCAACGACATCAACCCCAAGGCCAAGGTCCACGTGCTCGTGGTGCCCAAGAAGCACTACGCCAACGTCG
CCGAACTTGCCGCCGACGACCCGACCGAGCTGGCCCACATCGTCTCCATCGCGCAGAACATCGCCGACAAGGAATTTCAC
GGCGCCTACCGACTGGTGTTCAACACCGGTCTCGACGCCGGCCAGACCGTCTTCCACGTGCACGCGCACGTGATGACCGG
CGAAAAGCTCGACGAGTAG

Upstream 100 bases:

>100_bases
CGGTCCTGTAGCGTTGTCGCTGTTGTCTCGGGTGTTGGGACGTTACGAGTAACGCCCACGCGCTAAGCTGGTGCGTAGCA
ACATCAAACCAAGGAGCATG

Downstream 100 bases:

>100_bases
TAGGGGAATATCCGCTTCGTGGCAACGACTACACGTACCATCACCATCCCGCCCCAACTTGACCCCGTCGCCGTGCTCGG
CCCGGTTGACGAGGTCATTC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSESDDCLFCKIIAGQIPSSKVYEDETTYAFNDINPKAKVHVLVVPKKHYANVAELAADDPTELAHIVSIAQNIADKEFH
GAYRLVFNTGLDAGQTVFHVHAHVMTGEKLDE

Sequences:

>Translated_112_residues
MSESDDCLFCKIIAGQIPSSKVYEDETTYAFNDINPKAKVHVLVVPKKHYANVAELAADDPTELAHIVSIAQNIADKEFH
GAYRLVFNTGLDAGQTVFHVHAHVMTGEKLDE
>Mature_111_residues
SESDDCLFCKIIAGQIPSSKVYEDETTYAFNDINPKAKVHVLVVPKKHYANVAELAADDPTELAHIVSIAQNIADKEFHG
AYRLVFNTGLDAGQTVFHVHAHVMTGEKLDE

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=106, Percent_Identity=40.5660377358491, Blast_Score=95, Evalue=1e-20,
Organism=Homo sapiens, GI14211923, Length=105, Percent_Identity=36.1904761904762, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=35.7798165137615, Blast_Score=77, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=34.8623853211009, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320078, Length=100, Percent_Identity=40, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=34.8623853211009, Blast_Score=76, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=34.8623853211009, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12355; Mature: 12224

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESDDCLFCKIIAGQIPSSKVYEDETTYAFNDINPKAKVHVLVVPKKHYANVAELAADD
CCCCCCEEEEEEEECCCCCCCEECCCCCEEECCCCCCCEEEEEEECCHHHCCHHHHCCCC
PTELAHIVSIAQNIADKEFHGAYRLVFNTGLDAGQTVFHVHAHVMTGEKLDE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
SESDDCLFCKIIAGQIPSSKVYEDETTYAFNDINPKAKVHVLVVPKKHYANVAELAADD
CCCCCEEEEEEEECCCCCCCEECCCCCEEECCCCCCCEEEEEEECCHHHCCHHHHCCCC
PTELAHIVSIAQNIADKEFHGAYRLVFNTGLDAGQTVFHVHAHVMTGEKLDE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]