| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692420
Identifier: 213692420
GI number: 213692420
Start: 1697467
End: 1699089
Strand: Direct
Name: 213692420
Synonym: Blon_1549
Alternate gene names: NA
Gene position: 1697467-1699089 (Clockwise)
Preceding gene: 213692419
Following gene: 213692421
Centisome position: 59.92
GC content: 60.2
Gene sequence:
>1623_bases TTGGCCGAACTGCAGAGCCTTATCCCCGGCGACGAGGAGCCTGACGGCGATGCCATGCTGCTGACCCAGCTGGCGAACGG CCTCGTATCCCGTATTCCGACCCTATGCACGTTGAAGACGTTCTATGACGGCAAGGAGCAGGTGCCGGTCAAATCGATTC CGAAAAGCACCAACCAGTCCGGCTACGCGGTCTACCAGAGGTTCGTCTCCATCTGTCAATTGGATTTGGCGAAGGCCATC GCCGATGCGGTGATACACCGCCAGCGGCCCACCGGGTTCCGGCTCATCGCCGACAAGACGATGCGTTCCACTAAGGCGGA CGACATGTGGTCTCAGTGCCGCATGGAATTGAAGAGCCGTCAGATGTTCCACGATCTCGCCGTATACGGCAACGCCTACG CACTGGTCAACAAGAACAAGCTGCCATCGCATATCACGGTGCTCAGCCCGTGGAACACGTACGTCTCCTCGGACGAGGAT TCGGCGGTCAACTACTGGTACAAGGCCAGCGAGGGCTGCGAATATCTCGCCCTCTACCGTCTGATACGCAATGATGACGG CAGCGTGAAGGACGTCTACTGCCGCATCGCCTACAACGAGACCGACTCCCGAAGCCTCCTTGAAGAAGGCGACGAGGAGG AGATATACGGCATCGCCAACGACGATTCCAAGATTCATCCAACGCTGTCACCCACGTTCCAATGGGATGGCGGTGCGGAA AGCTCCTATGATTTCGCGGAGAAATGCGAATGCCTTCCCATCGTGCGCATGCACGCGCCGGGCGGCAAGGGCCAGTTCGA GCCGCATATCCCTACATTGGGCAGCATCGACCAGCAGCGTTTCCAGCGTTTCTGCATTCAGGAATTGCAGGCGTTCAAGC AGCGTGCCGTGTCGATGAGCAACATGCCTCAGTTCTACAAGGAGTCCGACCCGCAGGTTCGTGACGGTTTGGCTCAGGCC GGAGACCGTATCGACTACAAGGATCTGTTCCAGCAGGGGCCCGACGCATTGTGGCTGGTTCCCGGTGACGCGAAGTTCTG GGAGTCCGGCGTCACGGACATCAACCCGCTCATCACCGCCGTGGCTTCCGACATCAAGCATCTCGCCGCCTCCTCCGGCA CCCCGTTGGATATTCTCAGCCCGGACGTTTCCGGCAGCGCGGAAGGCGCACAGCTCAAGCGCGAGGGTCTGGTGTTCAAG GTCGAGGACATGAACGCGCGTGCCAATGACGGGTTCACCCGTCTCATGCGCATGGCGTTGGAGGCCGATGGCAACAGCGC CGCCGGCGAACGGTTCGAGACCGTGTGGAAGCCCATCAACCCTCCATCACAGTTGGAGCAGGCTCAGGCCGCGAACTATT CGAAGGGCATTCTTCCCGTCAAGACGAACATGCGCCGCAGCTACGGCATGACCGAGATCGAGATAGCCGAGGCCATGCAG GACCTCATGGACACGCAGTTCGCTCAGGCCATGGCCTCCGAGAACGCGATGATCGAAGGCAAGACCTCCCAGCAGTCGGC GGGCGTCCTGCCCGACGAGACGGATTCTCTCGCGTTCACCGATACCACGAGTGAAAACGACGTGGTGCAGGCGGATGAGC CCCCGACCGTGGACGGTGAATGA
Upstream 100 bases:
>100_bases CTACCGTGCCCGCGACATCTACTTGGGTGCCGCCGTTTCCAACGAAGAGGAGTCGTTCGCCCCCGTGCGCGTCTGGTGAA TCTGATGAAAGGAGGCCGCA
Downstream 100 bases:
>100_bases TGGCCGTTATGACCTTGGAGGTCGCATCCAACGCGCTCCAATCCTCACGTCAGAGGCTCGTCAACGAGTATGTGAGGCTG GCCCGCACCATGTGGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MAELQSLIPGDEEPDGDAMLLTQLANGLVSRIPTLCTLKTFYDGKEQVPVKSIPKSTNQSGYAVYQRFVSICQLDLAKAI ADAVIHRQRPTGFRLIADKTMRSTKADDMWSQCRMELKSRQMFHDLAVYGNAYALVNKNKLPSHITVLSPWNTYVSSDED SAVNYWYKASEGCEYLALYRLIRNDDGSVKDVYCRIAYNETDSRSLLEEGDEEEIYGIANDDSKIHPTLSPTFQWDGGAE SSYDFAEKCECLPIVRMHAPGGKGQFEPHIPTLGSIDQQRFQRFCIQELQAFKQRAVSMSNMPQFYKESDPQVRDGLAQA GDRIDYKDLFQQGPDALWLVPGDAKFWESGVTDINPLITAVASDIKHLAASSGTPLDILSPDVSGSAEGAQLKREGLVFK VEDMNARANDGFTRLMRMALEADGNSAAGERFETVWKPINPPSQLEQAQAANYSKGILPVKTNMRRSYGMTEIEIAEAMQ DLMDTQFAQAMASENAMIEGKTSQQSAGVLPDETDSLAFTDTTSENDVVQADEPPTVDGE
Sequences:
>Translated_540_residues MAELQSLIPGDEEPDGDAMLLTQLANGLVSRIPTLCTLKTFYDGKEQVPVKSIPKSTNQSGYAVYQRFVSICQLDLAKAI ADAVIHRQRPTGFRLIADKTMRSTKADDMWSQCRMELKSRQMFHDLAVYGNAYALVNKNKLPSHITVLSPWNTYVSSDED SAVNYWYKASEGCEYLALYRLIRNDDGSVKDVYCRIAYNETDSRSLLEEGDEEEIYGIANDDSKIHPTLSPTFQWDGGAE SSYDFAEKCECLPIVRMHAPGGKGQFEPHIPTLGSIDQQRFQRFCIQELQAFKQRAVSMSNMPQFYKESDPQVRDGLAQA GDRIDYKDLFQQGPDALWLVPGDAKFWESGVTDINPLITAVASDIKHLAASSGTPLDILSPDVSGSAEGAQLKREGLVFK VEDMNARANDGFTRLMRMALEADGNSAAGERFETVWKPINPPSQLEQAQAANYSKGILPVKTNMRRSYGMTEIEIAEAMQ DLMDTQFAQAMASENAMIEGKTSQQSAGVLPDETDSLAFTDTTSENDVVQADEPPTVDGE >Mature_539_residues AELQSLIPGDEEPDGDAMLLTQLANGLVSRIPTLCTLKTFYDGKEQVPVKSIPKSTNQSGYAVYQRFVSICQLDLAKAIA DAVIHRQRPTGFRLIADKTMRSTKADDMWSQCRMELKSRQMFHDLAVYGNAYALVNKNKLPSHITVLSPWNTYVSSDEDS AVNYWYKASEGCEYLALYRLIRNDDGSVKDVYCRIAYNETDSRSLLEEGDEEEIYGIANDDSKIHPTLSPTFQWDGGAES SYDFAEKCECLPIVRMHAPGGKGQFEPHIPTLGSIDQQRFQRFCIQELQAFKQRAVSMSNMPQFYKESDPQVRDGLAQAG DRIDYKDLFQQGPDALWLVPGDAKFWESGVTDINPLITAVASDIKHLAASSGTPLDILSPDVSGSAEGAQLKREGLVFKV EDMNARANDGFTRLMRMALEADGNSAAGERFETVWKPINPPSQLEQAQAANYSKGILPVKTNMRRSYGMTEIEIAEAMQD LMDTQFAQAMASENAMIEGKTSQQSAGVLPDETDSLAFTDTTSENDVVQADEPPTVDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59872; Mature: 59740
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELQSLIPGDEEPDGDAMLLTQLANGLVSRIPTLCTLKTFYDGKEQVPVKSIPKSTNQS CCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCCC GYAVYQRFVSICQLDLAKAIADAVIHRQRPTGFRLIADKTMRSTKADDMWSQCRMELKSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHH QMFHDLAVYGNAYALVNKNKLPSHITVLSPWNTYVSSDEDSAVNYWYKASEGCEYLALYR HHHHHHHHHCCEEEEEECCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHHHHH LIRNDDGSVKDVYCRIAYNETDSRSLLEEGDEEEIYGIANDDSKIHPTLSPTFQWDGGAE HHHCCCCCEEEEEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCCCCC SSYDFAEKCECLPIVRMHAPGGKGQFEPHIPTLGSIDQQRFQRFCIQELQAFKQRAVSMS CCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NMPQFYKESDPQVRDGLAQAGDRIDYKDLFQQGPDALWLVPGDAKFWESGVTDINPLITA CCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHHH VASDIKHLAASSGTPLDILSPDVSGSAEGAQLKREGLVFKVEDMNARANDGFTRLMRMAL HHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH EADGNSAAGERFETVWKPINPPSQLEQAQAANYSKGILPVKTNMRRSYGMTEIEIAEAMQ HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHCCCCHHHHHHHHH DLMDTQFAQAMASENAMIEGKTSQQSAGVLPDETDSLAFTDTTSENDVVQADEPPTVDGE HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCC >Mature Secondary Structure AELQSLIPGDEEPDGDAMLLTQLANGLVSRIPTLCTLKTFYDGKEQVPVKSIPKSTNQS CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCCC GYAVYQRFVSICQLDLAKAIADAVIHRQRPTGFRLIADKTMRSTKADDMWSQCRMELKSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHH QMFHDLAVYGNAYALVNKNKLPSHITVLSPWNTYVSSDEDSAVNYWYKASEGCEYLALYR HHHHHHHHHCCEEEEEECCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHHHHH LIRNDDGSVKDVYCRIAYNETDSRSLLEEGDEEEIYGIANDDSKIHPTLSPTFQWDGGAE HHHCCCCCEEEEEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCCCCC SSYDFAEKCECLPIVRMHAPGGKGQFEPHIPTLGSIDQQRFQRFCIQELQAFKQRAVSMS CCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NMPQFYKESDPQVRDGLAQAGDRIDYKDLFQQGPDALWLVPGDAKFWESGVTDINPLITA CCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHHH VASDIKHLAASSGTPLDILSPDVSGSAEGAQLKREGLVFKVEDMNARANDGFTRLMRMAL HHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH EADGNSAAGERFETVWKPINPPSQLEQAQAANYSKGILPVKTNMRRSYGMTEIEIAEAMQ HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHCCCCHHHHHHHHH DLMDTQFAQAMASENAMIEGKTSQQSAGVLPDETDSLAFTDTTSENDVVQADEPPTVDGE HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA