| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692411
Identifier: 213692411
GI number: 213692411
Start: 1688644
End: 1688985
Strand: Reverse
Name: 213692411
Synonym: Blon_1540
Alternate gene names: NA
Gene position: 1688985-1688644 (Counterclockwise)
Preceding gene: 213692412
Following gene: 213692410
Centisome position: 59.62
GC content: 53.8
Gene sequence:
>342_bases ATGAGCGAGCTGAGAGACAAGGCCACGCGACTGTTGTTGAAGTCGGCGTGGGAAATGGCCGATGACAACGAAGATGAGCT ATCCGCCGTGTTCGATGGTCAGCATGGTTTCATCGATGATTTACGCCGGCGCGCGATGGACACCTTGGAGGGTGTCGGCT GTATGCCCAGTACGCCGCCTGACAATGATGAAATGGAACGTTTGACCGCTGATAGCGGTTTCACGTTGGACGTGCTGGAT AAGAGAGCGCGTGAGGTTTACGACTGTGCTTATTCCACCACGTATCAGCGTTATCAAACCGCTATCGCCATGCTTGTCGA TGATTTGCTGGGAGTGCTGTGA
Upstream 100 bases:
>100_bases TACCGTGCAAGGTATGAGCGTGGCAGTGACAAGCAGTTAGAACAGGCGGTGGCCGATTACGTGGCCGTTGCCCGTAACCT GTGGGCTAAGGCGGCGTGAC
Downstream 100 bases:
>100_bases TGGAAGTCAGGATATCCACGGCGAAGATTCGTGAGGTGCTGGAATCGTCCGGTTGCGCCTACACTGCCGGGAATATCGCG GCCGTGCGTGCCAACATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSELRDKATRLLLKSAWEMADDNEDELSAVFDGQHGFIDDLRRRAMDTLEGVGCMPSTPPDNDEMERLTADSGFTLDVLD KRAREVYDCAYSTTYQRYQTAIAMLVDDLLGVL
Sequences:
>Translated_113_residues MSELRDKATRLLLKSAWEMADDNEDELSAVFDGQHGFIDDLRRRAMDTLEGVGCMPSTPPDNDEMERLTADSGFTLDVLD KRAREVYDCAYSTTYQRYQTAIAMLVDDLLGVL >Mature_112_residues SELRDKATRLLLKSAWEMADDNEDELSAVFDGQHGFIDDLRRRAMDTLEGVGCMPSTPPDNDEMERLTADSGFTLDVLDK RAREVYDCAYSTTYQRYQTAIAMLVDDLLGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12787; Mature: 12656
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRDKATRLLLKSAWEMADDNEDELSAVFDGQHGFIDDLRRRAMDTLEGVGCMPSTPP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DNDEMERLTADSGFTLDVLDKRAREVYDCAYSTTYQRYQTAIAMLVDDLLGVL CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SELRDKATRLLLKSAWEMADDNEDELSAVFDGQHGFIDDLRRRAMDTLEGVGCMPSTPP CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DNDEMERLTADSGFTLDVLDKRAREVYDCAYSTTYQRYQTAIAMLVDDLLGVL CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA