| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692383
Identifier: 213692383
GI number: 213692383
Start: 1673411
End: 1673656
Strand: Direct
Name: 213692383
Synonym: Blon_1510
Alternate gene names: NA
Gene position: 1673411-1673656 (Clockwise)
Preceding gene: 213692382
Following gene: 213692384
Centisome position: 59.07
GC content: 54.47
Gene sequence:
>246_bases ATGAGCGACATGAGGAGCTTCATCAAGGTTAGCCATGAACGTTTCACTTTGATTCTGCGCAAGGGGATGCTCCCGTTCCA CTGGATTGCGGAGTCTCATGTCTTCCCGGACAAGGGTTATGTCACATCGGTGCGAGAGCGCGCCAACTACGGCGCAGTAT GGGCGTTGAGCAGTATGGGCGCTCTCGATCAGGTCATGCCCTCGATCTGGGAGGACATCAAATGGTTGGACGAAAGGATG GACTGA
Upstream 100 bases:
>100_bases GAGGCCCGGAGACGCAGAAGCCGTTCAAACTCGTGAAGCTGACCAGCTATCGCACACGGTTGCTTGTGGAGATCAATTAT CCGATGGAGGCAACGGAGGA
Downstream 100 bases:
>100_bases TGCGTTTTCACAAAATTAGCCCGTGTCCCAAATGCGGGGGCAAGGTCAAGGCGAAATGGGAGGAGCAGCATTATCTGTCC GCTTTGGTCTTCCGGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSDMRSFIKVSHERFTLILRKGMLPFHWIAESHVFPDKGYVTSVRERANYGAVWALSSMGALDQVMPSIWEDIKWLDERM D
Sequences:
>Translated_81_residues MSDMRSFIKVSHERFTLILRKGMLPFHWIAESHVFPDKGYVTSVRERANYGAVWALSSMGALDQVMPSIWEDIKWLDERM D >Mature_80_residues SDMRSFIKVSHERFTLILRKGMLPFHWIAESHVFPDKGYVTSVRERANYGAVWALSSMGALDQVMPSIWEDIKWLDERMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9518; Mature: 9387
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMRSFIKVSHERFTLILRKGMLPFHWIAESHVFPDKGYVTSVRERANYGAVWALSSMG CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHCC ALDQVMPSIWEDIKWLDERMD HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDMRSFIKVSHERFTLILRKGMLPFHWIAESHVFPDKGYVTSVRERANYGAVWALSSMG CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHCC ALDQVMPSIWEDIKWLDERMD HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA