| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692364
Identifier: 213692364
GI number: 213692364
Start: 1662410
End: 1662847
Strand: Direct
Name: 213692364
Synonym: Blon_1491
Alternate gene names: NA
Gene position: 1662410-1662847 (Clockwise)
Preceding gene: 213692363
Following gene: 213692365
Centisome position: 58.69
GC content: 57.31
Gene sequence:
>438_bases ATGACAAGCATATTCGACGTGGCCGCTTACGTGCTGGACAAGCTCGGCGTCATGACCACAATGAAACTGGAAAAGCTCTG CTACTATTCACAGGCATGGTCCCTCGTATGGGATGAACGGCGTCTGTTCCCCGAACGGTTCGAGGCATGGGCCAACGGCC CGGTATGCCCCGACCTATACCATGCGCACAAGGGCATGTTCAAGATCACGCGCGGCGATATTCACGGCGACCCGTCCAAC ATTGACGAGGACGGCATCAACACCATAGACGCCGTGTTGAAGGCCTACGGGAAAATGGGAGCCTACCAGTTGAGCGAACT CACCCACAGCGAACGCCCTTGGAAGGACGCTCGCGGCAATCTCCCCCAAGGCGCCATCTGCAACACCGAGATAACTGAAG CCGCCATGGCCGAATACTATGGGAGCCTCACCGAATAG
Upstream 100 bases:
>100_bases GAAGGCGTGAACTGGCGCGCCGAAACTTGCCGGCCATACAATGGAAGAGTAAGTTAATCACCTTGAATGTCCAGCGGAAG GAACGTTACGGAGGCGCACC
Downstream 100 bases:
>100_bases TGGGCCACCGCAGCAAAACCAAGAGCATCAAGGCCAAAGCCCCGAGCTCTTCAAAACGTGTGCCCGCGCATCACGTGGCG AAAAGCTATCATGTCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Protein; Prophage Ps3 Protein; Xin-Antitoxin System Antitoxin Component Xre Family; Phage-Associated Protein-Like Protein; Prophage Ps3 ; Phage Cro/CI Transcriptional Regulator; CPW-WPC Domain Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTSIFDVAAYVLDKLGVMTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPDLYHAHKGMFKITRGDIHGDPSN IDEDGINTIDAVLKAYGKMGAYQLSELTHSERPWKDARGNLPQGAICNTEITEAAMAEYYGSLTE
Sequences:
>Translated_145_residues MTSIFDVAAYVLDKLGVMTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPDLYHAHKGMFKITRGDIHGDPSN IDEDGINTIDAVLKAYGKMGAYQLSELTHSERPWKDARGNLPQGAICNTEITEAAMAEYYGSLTE >Mature_144_residues TSIFDVAAYVLDKLGVMTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPDLYHAHKGMFKITRGDIHGDPSNI DEDGINTIDAVLKAYGKMGAYQLSELTHSERPWKDARGNLPQGAICNTEITEAAMAEYYGSLTE
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16374; Mature: 16242
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIFDVAAYVLDKLGVMTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPDLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHH HAHKGMFKITRGDIHGDPSNIDEDGINTIDAVLKAYGKMGAYQLSELTHSERPWKDARGN HHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCC LPQGAICNTEITEAAMAEYYGSLTE CCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TSIFDVAAYVLDKLGVMTTMKLEKLCYYSQAWSLVWDERRLFPERFEAWANGPVCPDLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHH HAHKGMFKITRGDIHGDPSNIDEDGINTIDAVLKAYGKMGAYQLSELTHSERPWKDARGN HHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCC LPQGAICNTEITEAAMAEYYGSLTE CCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA