| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692281
Identifier: 213692281
GI number: 213692281
Start: 1567308
End: 1567934
Strand: Direct
Name: 213692281
Synonym: Blon_1403
Alternate gene names: NA
Gene position: 1567308-1567934 (Clockwise)
Preceding gene: 213692280
Following gene: 213692282
Centisome position: 55.33
GC content: 64.75
Gene sequence:
>627_bases ATGACGGGAATGATTCGCGCTCAGGCAAGGCGCATCGGCATGGGATTGCTGGCAATGCCCGTGGCCTGTGGGATTGCGGT GGCGGCAGCCGGCGTCATGGTATCCGGCGTGTGGTCGCGTACGCAAACATTGATGGTGGTGAACTGGCTCGCCCAGCTGA TGGTGATCGGCTCGGGCGTGTGCGTGGCGGTCGCATTGACCGGTGACCCGCTGGTCGAGGCGAGCGAGTCCACGCCCGTG GGTTGGAGGCGCGTGCAAACCACACGGTTCGCGCTCACGGCTGTATCCACTCTTGTGGGTGCCGTGCTTATGTTCGCGCC GTTGCATGTATTGGGCCTATGGCCGCAGGATATGGGATGGATAAGTCTGATCGCGCCGGCCGGCGCGATACTGGTCGTGG GCCTGGCCGGGTTCGCGGCCGCCGCATGGTCCGCGTCCGCACAGGCCACGGTCATGGCGGTGGTCGCCGTATGGATGTTC CTCGCCCTGCTGTGGGACCCGTACGTGCTCGATCCGGTCACGCAACGCGGCATCCCAATCGCCGTCTCCATGATCGCCGT AGTGTTCGCGTGGCGTCTGCTGGGCGACGAGGAACGCAACGTGACGCTCGCAAGGAGAAGCATATGA
Upstream 100 bases:
>100_bases TCGGCATGTCGCGTGAACTTCAGGACAGGCGGCCGCTACCTACTTGGTGACGAACAAAAAGAATGACCGTCAACTTCATC GGACTTCAAGGAGGGTCGGC
Downstream 100 bases:
>100_bases GTCCTTGCACCGGTTTCCGGCATCTGACCCGCGTCCACATGATCATCGTGTGGCGGCAACGTTCATTATGGGTCGCGGTT GTCCCGCTGGCCTTGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTGMIRAQARRIGMGLLAMPVACGIAVAAAGVMVSGVWSRTQTLMVVNWLAQLMVIGSGVCVAVALTGDPLVEASESTPV GWRRVQTTRFALTAVSTLVGAVLMFAPLHVLGLWPQDMGWISLIAPAGAILVVGLAGFAAAAWSASAQATVMAVVAVWMF LALLWDPYVLDPVTQRGIPIAVSMIAVVFAWRLLGDEERNVTLARRSI
Sequences:
>Translated_208_residues MTGMIRAQARRIGMGLLAMPVACGIAVAAAGVMVSGVWSRTQTLMVVNWLAQLMVIGSGVCVAVALTGDPLVEASESTPV GWRRVQTTRFALTAVSTLVGAVLMFAPLHVLGLWPQDMGWISLIAPAGAILVVGLAGFAAAAWSASAQATVMAVVAVWMF LALLWDPYVLDPVTQRGIPIAVSMIAVVFAWRLLGDEERNVTLARRSI >Mature_207_residues TGMIRAQARRIGMGLLAMPVACGIAVAAAGVMVSGVWSRTQTLMVVNWLAQLMVIGSGVCVAVALTGDPLVEASESTPVG WRRVQTTRFALTAVSTLVGAVLMFAPLHVLGLWPQDMGWISLIAPAGAILVVGLAGFAAAAWSASAQATVMAVVAVWMFL ALLWDPYVLDPVTQRGIPIAVSMIAVVFAWRLLGDEERNVTLARRSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21912; Mature: 21781
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMIRAQARRIGMGLLAMPVACGIAVAAAGVMVSGVWSRTQTLMVVNWLAQLMVIGSGV CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE CVAVALTGDPLVEASESTPVGWRRVQTTRFALTAVSTLVGAVLMFAPLHVLGLWPQDMGW EEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ISLIAPAGAILVVGLAGFAAAAWSASAQATVMAVVAVWMFLALLWDPYVLDPVTQRGIPI HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHCCCHH AVSMIAVVFAWRLLGDEERNVTLARRSI HHHHHHHHHHHHHHCCCCCCEEEHCCCC >Mature Secondary Structure TGMIRAQARRIGMGLLAMPVACGIAVAAAGVMVSGVWSRTQTLMVVNWLAQLMVIGSGV CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE CVAVALTGDPLVEASESTPVGWRRVQTTRFALTAVSTLVGAVLMFAPLHVLGLWPQDMGW EEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ISLIAPAGAILVVGLAGFAAAAWSASAQATVMAVVAVWMFLALLWDPYVLDPVTQRGIPI HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHCCCHH AVSMIAVVFAWRLLGDEERNVTLARRSI HHHHHHHHHHHHHHCCCCCCEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA