| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692269
Identifier: 213692269
GI number: 213692269
Start: 1556407
End: 1557213
Strand: Reverse
Name: 213692269
Synonym: Blon_1390
Alternate gene names: NA
Gene position: 1557213-1556407 (Counterclockwise)
Preceding gene: 213692271
Following gene: 213692268
Centisome position: 54.97
GC content: 54.28
Gene sequence:
>807_bases ATGAGCCGACAGTCAAATTCAACAACTGATTTCCTCTCACGGACTCCAAGGAAAGGAAGTCCGCGGGAGAAGGCGCTGCG CGCGTGCATTACCGATGAACGGCTTGCCACCTACAATTATGAGGCTCAAAGACGTTCATGCCCAGCGCTAGAGCTGTACC TGTGGGATCACGACATGGCCAGCGCCTGTATGGGCGACATCGCCATCCTCGAGGTCGCTCTGCGCAACCGCATGGACCGG CAACTCTCCCTCCTCGCTCTGGAGCAGAATGGCACTGAAGACTGGTATATGGCAGGGCTACAATTCGATGACCGAACCCA GTACCAGATTCGTGAAGCGTGGAACCATCTCACCCCGCACCAGCGAAAAAATCATACGCATGGCCATCTCATAGCGTCAT TGACATTCGGATTTTGGCGCAATCTCTTGGAAGACGGCGGAACAATCCACACGAAGTGGCCAGACCAGCGCCGTGCAGAT TATGAGAACGATTTATGGCGCAAAGGACTCGATAAGACATTCTCCAATGGGCGCCAGTATGCCCGTGCAGTGGAAGAACG CTGGACGAGAAAGTACGCGCTGGATATCGTAAAAACAGTGCATGCCCTGCGTAATCGGGTCGCTCACCATGAGCCGCTTG TCAACGGCATACCTCTGCCGGGTGAGAATCGACGGATTGCATTGGAGAATGCGACGCAGGCGTGCTTCGCTCTGGCGATG ATCCTGGACCGAGACCTACACGCATGGTTGATGGATAACAGCAAGATGAAACTTGTGCTCGAACACGAGCTGAAGCCTAA TGAATAG
Upstream 100 bases:
>100_bases CGATTATCCAGATAAAAAGAAACCCCCAGTGCATCACGGCTGAGTCGAAGACCGTCCGGAGAGGCCCTTTGGGGGAATTC TTGATATATCATAATGAGCC
Downstream 100 bases:
>100_bases GTAGTGAGTATCGTTTTCGCCAATCATCTCTTCAGTGGGAATGGCAATGAGCTGCAGCGACACCAACAGATTCCTTAGGA TCCGACACCGGCACGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSRQSNSTTDFLSRTPRKGSPREKALRACITDERLATYNYEAQRRSCPALELYLWDHDMASACMGDIAILEVALRNRMDR QLSLLALEQNGTEDWYMAGLQFDDRTQYQIREAWNHLTPHQRKNHTHGHLIASLTFGFWRNLLEDGGTIHTKWPDQRRAD YENDLWRKGLDKTFSNGRQYARAVEERWTRKYALDIVKTVHALRNRVAHHEPLVNGIPLPGENRRIALENATQACFALAM ILDRDLHAWLMDNSKMKLVLEHELKPNE
Sequences:
>Translated_268_residues MSRQSNSTTDFLSRTPRKGSPREKALRACITDERLATYNYEAQRRSCPALELYLWDHDMASACMGDIAILEVALRNRMDR QLSLLALEQNGTEDWYMAGLQFDDRTQYQIREAWNHLTPHQRKNHTHGHLIASLTFGFWRNLLEDGGTIHTKWPDQRRAD YENDLWRKGLDKTFSNGRQYARAVEERWTRKYALDIVKTVHALRNRVAHHEPLVNGIPLPGENRRIALENATQACFALAM ILDRDLHAWLMDNSKMKLVLEHELKPNE >Mature_267_residues SRQSNSTTDFLSRTPRKGSPREKALRACITDERLATYNYEAQRRSCPALELYLWDHDMASACMGDIAILEVALRNRMDRQ LSLLALEQNGTEDWYMAGLQFDDRTQYQIREAWNHLTPHQRKNHTHGHLIASLTFGFWRNLLEDGGTIHTKWPDQRRADY ENDLWRKGLDKTFSNGRQYARAVEERWTRKYALDIVKTVHALRNRVAHHEPLVNGIPLPGENRRIALENATQACFALAMI LDRDLHAWLMDNSKMKLVLEHELKPNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31306; Mature: 31175
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQSNSTTDFLSRTPRKGSPREKALRACITDERLATYNYEAQRRSCPALELYLWDHDMA CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHCCCEEEEEEECCHHH SACMGDIAILEVALRNRMDRQLSLLALEQNGTEDWYMAGLQFDDRTQYQIREAWNHLTPH HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC QRKNHTHGHLIASLTFGFWRNLLEDGGTIHTKWPDQRRADYENDLWRKGLDKTFSNGRQY CCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHH ARAVEERWTRKYALDIVKTVHALRNRVAHHEPLVNGIPLPGENRRIALENATQACFALAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH ILDRDLHAWLMDNSKMKLVLEHELKPNE HHHCCHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure SRQSNSTTDFLSRTPRKGSPREKALRACITDERLATYNYEAQRRSCPALELYLWDHDMA CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHCCCEEEEEEECCHHH SACMGDIAILEVALRNRMDRQLSLLALEQNGTEDWYMAGLQFDDRTQYQIREAWNHLTPH HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC QRKNHTHGHLIASLTFGFWRNLLEDGGTIHTKWPDQRRADYENDLWRKGLDKTFSNGRQY CCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHH ARAVEERWTRKYALDIVKTVHALRNRVAHHEPLVNGIPLPGENRRIALENATQACFALAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH ILDRDLHAWLMDNSKMKLVLEHELKPNE HHHCCHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA