| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692261
Identifier: 213692261
GI number: 213692261
Start: 1548639
End: 1548884
Strand: Reverse
Name: 213692261
Synonym: Blon_1381
Alternate gene names: NA
Gene position: 1548884-1548639 (Counterclockwise)
Preceding gene: 213692268
Following gene: 213692260
Centisome position: 54.68
GC content: 61.38
Gene sequence:
>246_bases ATGAGCCTGCTGGCCGAGTCGTTCGGCCTGACGCCGGTCGTGCCGCCCAAGAGGAACCGCACGGACCCATGGGACTACGA CAGGCAGGCGCACAAGGGACGGAACATGGTCGAACGCGTCTTCAACCGCATGAAGCACCACCGCAAGGCCGCCACCCGCT ACGACAGGCTCGACGCCACCTTCCTCGCCAACCTCCAACTCATCCTCATCACCATCCAACTCAAAAACACCAGCAAAACC AACTAG
Upstream 100 bases:
>100_bases GTGAAGGTCCACCAGCACGCCACGGGAGCCGCTCCATGGCCGCGCCCGGCGCGTTCATGGGCGCGCGCCTGCTCATGGAC CGCGCGCACGAGGGGGGTCC
Downstream 100 bases:
>100_bases AGCAAACACACCCTAGATAAGGCTTGCGGCCGTTGGCCGAGCAGTAGTAGTGTGGTTTGCTATGTCAAACAGGAGGAGTG TGACCAATGCGGCTGATCGA
Product: ISXoo11 transposase
Products: NA
Alternate protein names: Transposase; ISXoo11 Transposase; Transposase IS4 Family
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSLLAESFGLTPVVPPKRNRTDPWDYDRQAHKGRNMVERVFNRMKHHRKAATRYDRLDATFLANLQLILITIQLKNTSKT N
Sequences:
>Translated_81_residues MSLLAESFGLTPVVPPKRNRTDPWDYDRQAHKGRNMVERVFNRMKHHRKAATRYDRLDATFLANLQLILITIQLKNTSKT N >Mature_80_residues SLLAESFGLTPVVPPKRNRTDPWDYDRQAHKGRNMVERVFNRMKHHRKAATRYDRLDATFLANLQLILITIQLKNTSKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9507; Mature: 9376
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLAESFGLTPVVPPKRNRTDPWDYDRQAHKGRNMVERVFNRMKHHRKAATRYDRLDAT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH FLANLQLILITIQLKNTSKTN HHHCEEEEEEEEEECCCCCCC >Mature Secondary Structure SLLAESFGLTPVVPPKRNRTDPWDYDRQAHKGRNMVERVFNRMKHHRKAATRYDRLDAT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH FLANLQLILITIQLKNTSKTN HHHCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA