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The map label for this gene is ybgF [H]

Identifier: 213692254

GI number: 213692254

Start: 1542626

End: 1544026

Strand: Direct

Name: ybgF [H]

Synonym: Blon_1374

Alternate gene names: 213692254

Gene position: 1542626-1544026 (Clockwise)

Preceding gene: 213692252

Following gene: 213692255

Centisome position: 54.46

GC content: 61.96

Gene sequence:

>1401_bases
ATGGCGGCAGCCGGCACACCCAAGGACGATACCGGCCTTGAACGAAAGATGGAGTCGCGCCACCTGACGATGATCTCCCT
GGGCGGCGTGATCGGCACCGGTCTGTTCGTCAGCTCCGGCTACACGATTCATCAGGCGGGGCCGTTGGGCGCGATCCTCG
CTTACGCGGCCGGCTCTCTGCTCGTATACTGTGTGATGGTGTCGCTGGGCGAGCTGTCCGTGGCCATGCCGTACGCCGGC
AGTTTCCACATGTATGCGAAGCGGTTCATCGGCCCCGGCACCGCGTTCACCATCGCCATCCTGTATTGGCTGAACTGGGC
GGTGGCGCTCGCCTCCGGATTTACGGCCGCGGGGTTGTTGATGCAGCGATGGTTCCCGCATTCGCCGTCCTGGGTGTGGT
CGGCCGTGTTCATTGTGGTGGTGTTCGCGCTCAATATCATGTCCGTGCGGCTGTACGGCGAGGCGGAATTCTGGTTTGCG
TCGATCAAGGTGTTCGCCATCGTCGCGTTCATTGTGATCGGCCTGCTGGCGATCTTCGGCGCCATACCGATTGCCGGCCA
TGATTCCGCGCCATTGTTCACCAACTTCGTGGCCGGCGGCTGGTTCCCGAGCGGCATCGCGCCGATTTTCTCGACTTTGC
TGACCGTGGTGTTCGCGTTCTCCGGCACCGAAGTGGTGGGCGTGGCGGCCGGCGAAACCAAGGATCCCTCGCGTGCGATC
CCCAAGGCCGTGCACACCACGGTGCTGCGCCTGGTAATTTTCTTCATCGGCTCGATTCTGGTGATGGCGGCCTTGATCCC
CTGGCATCAGGCCGGCGTGGATACGAGCCCGTTCGTGCTGGTGTTCCAGTCAATCGGTATGCCGTTCGCCGGCGACATCA
TGAACTTCGTGGTGCTCACGGCTGTGCTTTCCGCCGCGAACTCCGGCCTGTACGTGTGTTCGCGCATGGTGTGGTCGCTG
GCCAAGGAGCGGCTGATTCCCGAACGTTTTGCTAAGACGAATTTCCGTGGTGTGCCGGTGTGGGCCGTGCTGTTCAGCAT
GGCGGGCTCGCTGCTGGCGTTGCTGTCTTCCGTGATCGCCGCTTCGACCGTGTATCTGGTGTTGGTCGCCGTATCCGGCT
TGGCGACGCTGGTGGTGTGGTTCTCCGTGTGCGTGTGCCATATCCGGTTTAGGCGTGAATGGACGCGGGATGGTCATAGT
GCCGACGAACTCGGCTATCGCGCTCCCGGCTTTCCGGTGTTGCCGTGGCTGGCCATCGTGATGTGCATCGGCGCGCTGCT
GCTCGTGGTGCTCGATGAGACGCAACGTTCGACCCTGTATTGCATGATTCCGTTCGTCGTCTGCTGCTACGCGGCCTATT
ACGCCCTCGAACGCCAACGCAAACGCGAAAAGAATACCTAA

Upstream 100 bases:

>100_bases
GCTGTTCGTGTTACCGCTATCATATGGTAGGCGGTATCGCGCGCCGCCCGCACAACCGACACGAGACACAACTGTTCACC
CGACCAAAGGAGACCCGAGC

Downstream 100 bases:

>100_bases
CTCGGTTTCGAGGGGCTGATTCGGCGTTCGCCGGAGGTCTACTTGCGTTTCAAGGGGCTGATGCCCAAGTAGGCAAGGCT
CCGAAATGGCGTCATGTCGT

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MAAAGTPKDDTGLERKMESRHLTMISLGGVIGTGLFVSSGYTIHQAGPLGAILAYAAGSLLVYCVMVSLGELSVAMPYAG
SFHMYAKRFIGPGTAFTIAILYWLNWAVALASGFTAAGLLMQRWFPHSPSWVWSAVFIVVVFALNIMSVRLYGEAEFWFA
SIKVFAIVAFIVIGLLAIFGAIPIAGHDSAPLFTNFVAGGWFPSGIAPIFSTLLTVVFAFSGTEVVGVAAGETKDPSRAI
PKAVHTTVLRLVIFFIGSILVMAALIPWHQAGVDTSPFVLVFQSIGMPFAGDIMNFVVLTAVLSAANSGLYVCSRMVWSL
AKERLIPERFAKTNFRGVPVWAVLFSMAGSLLALLSSVIAASTVYLVLVAVSGLATLVVWFSVCVCHIRFRREWTRDGHS
ADELGYRAPGFPVLPWLAIVMCIGALLLVVLDETQRSTLYCMIPFVVCCYAAYYALERQRKREKNT

Sequences:

>Translated_466_residues
MAAAGTPKDDTGLERKMESRHLTMISLGGVIGTGLFVSSGYTIHQAGPLGAILAYAAGSLLVYCVMVSLGELSVAMPYAG
SFHMYAKRFIGPGTAFTIAILYWLNWAVALASGFTAAGLLMQRWFPHSPSWVWSAVFIVVVFALNIMSVRLYGEAEFWFA
SIKVFAIVAFIVIGLLAIFGAIPIAGHDSAPLFTNFVAGGWFPSGIAPIFSTLLTVVFAFSGTEVVGVAAGETKDPSRAI
PKAVHTTVLRLVIFFIGSILVMAALIPWHQAGVDTSPFVLVFQSIGMPFAGDIMNFVVLTAVLSAANSGLYVCSRMVWSL
AKERLIPERFAKTNFRGVPVWAVLFSMAGSLLALLSSVIAASTVYLVLVAVSGLATLVVWFSVCVCHIRFRREWTRDGHS
ADELGYRAPGFPVLPWLAIVMCIGALLLVVLDETQRSTLYCMIPFVVCCYAAYYALERQRKREKNT
>Mature_465_residues
AAAGTPKDDTGLERKMESRHLTMISLGGVIGTGLFVSSGYTIHQAGPLGAILAYAAGSLLVYCVMVSLGELSVAMPYAGS
FHMYAKRFIGPGTAFTIAILYWLNWAVALASGFTAAGLLMQRWFPHSPSWVWSAVFIVVVFALNIMSVRLYGEAEFWFAS
IKVFAIVAFIVIGLLAIFGAIPIAGHDSAPLFTNFVAGGWFPSGIAPIFSTLLTVVFAFSGTEVVGVAAGETKDPSRAIP
KAVHTTVLRLVIFFIGSILVMAALIPWHQAGVDTSPFVLVFQSIGMPFAGDIMNFVVLTAVLSAANSGLYVCSRMVWSLA
KERLIPERFAKTNFRGVPVWAVLFSMAGSLLALLSSVIAASTVYLVLVAVSGLATLVVWFSVCVCHIRFRREWTRDGHSA
DELGYRAPGFPVLPWLAIVMCIGALLLVVLDETQRSTLYCMIPFVVCCYAAYYALERQRKREKNT

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081708, Length=461, Percent_Identity=52.4945770065076, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI1788480, Length=469, Percent_Identity=39.6588486140725, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1786789, Length=465, Percent_Identity=34.8387096774194, Blast_Score=291, Evalue=7e-80,
Organism=Escherichia coli, GI1786302, Length=457, Percent_Identity=34.3544857768052, Blast_Score=277, Evalue=9e-76,
Organism=Escherichia coli, GI48994972, Length=464, Percent_Identity=37.0689655172414, Blast_Score=271, Evalue=4e-74,
Organism=Escherichia coli, GI87081915, Length=410, Percent_Identity=35.8536585365854, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1790653, Length=441, Percent_Identity=33.7868480725624, Blast_Score=254, Evalue=9e-69,
Organism=Escherichia coli, GI1786602, Length=468, Percent_Identity=34.1880341880342, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1789017, Length=437, Percent_Identity=34.7826086956522, Blast_Score=241, Evalue=8e-65,
Organism=Escherichia coli, GI87081869, Length=341, Percent_Identity=24.0469208211144, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI2367353, Length=464, Percent_Identity=25.6465517241379, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17532491, Length=433, Percent_Identity=23.3256351039261, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320772, Length=436, Percent_Identity=33.7155963302752, Blast_Score=256, Evalue=5e-69,
Organism=Saccharomyces cerevisiae, GI6324061, Length=422, Percent_Identity=34.5971563981043, Blast_Score=253, Evalue=6e-68,
Organism=Saccharomyces cerevisiae, GI6324059, Length=431, Percent_Identity=32.7146171693735, Blast_Score=227, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6324553, Length=404, Percent_Identity=33.6633663366337, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6322892, Length=417, Percent_Identity=33.8129496402878, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6321629, Length=414, Percent_Identity=31.1594202898551, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6324990, Length=439, Percent_Identity=28.246013667426, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6320717, Length=416, Percent_Identity=30.0480769230769, Blast_Score=199, Evalue=9e-52,
Organism=Saccharomyces cerevisiae, GI6321053, Length=453, Percent_Identity=28.476821192053, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6324924, Length=434, Percent_Identity=29.9539170506912, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6319543, Length=426, Percent_Identity=28.6384976525822, Blast_Score=196, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6319824, Length=493, Percent_Identity=27.1805273833671, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6319542, Length=410, Percent_Identity=28.0487804878049, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322967, Length=440, Percent_Identity=29.0909090909091, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6319608, Length=441, Percent_Identity=26.530612244898, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6324981, Length=418, Percent_Identity=30.8612440191388, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6320251, Length=412, Percent_Identity=26.4563106796117, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6320364, Length=501, Percent_Identity=25.3493013972056, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI221512776, Length=474, Percent_Identity=20.8860759493671, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24666159, Length=474, Percent_Identity=20.8860759493671, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50402; Mature: 50271

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAGTPKDDTGLERKMESRHLTMISLGGVIGTGLFVSSGYTIHQAGPLGAILAYAAGSL
CCCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHH
LVYCVMVSLGELSVAMPYAGSFHMYAKRFIGPGTAFTIAILYWLNWAVALASGFTAAGLL
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
MQRWFPHSPSWVWSAVFIVVVFALNIMSVRLYGEAEFWFASIKVFAIVAFIVIGLLAIFG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPIAGHDSAPLFTNFVAGGWFPSGIAPIFSTLLTVVFAFSGTEVVGVAAGETKDPSRAI
CCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
PKAVHTTVLRLVIFFIGSILVMAALIPWHQAGVDTSPFVLVFQSIGMPFAGDIMNFVVLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
AVLSAANSGLYVCSRMVWSLAKERLIPERFAKTNFRGVPVWAVLFSMAGSLLALLSSVIA
HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASTVYLVLVAVSGLATLVVWFSVCVCHIRFRREWTRDGHSADELGYRAPGFPVLPWLAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHH
MCIGALLLVVLDETQRSTLYCMIPFVVCCYAAYYALERQRKREKNT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAAGTPKDDTGLERKMESRHLTMISLGGVIGTGLFVSSGYTIHQAGPLGAILAYAAGSL
CCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHH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HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]