Click here to switch to the map view.

The map label for this gene is 213692243

Identifier: 213692243

GI number: 213692243

Start: 1532723

End: 1533055

Strand: Reverse

Name: 213692243

Synonym: Blon_1363

Alternate gene names: NA

Gene position: 1533055-1532723 (Counterclockwise)

Preceding gene: 213692244

Following gene: 213692242

Centisome position: 54.12

GC content: 59.76

Gene sequence:

>333_bases
ATGGCAGCCGTTCTGGGACTGATCATCGGCGTCGTCATCGGCGTGTTCGTCAAGCCGGATATTCCGATCATCGTGCAGCC
TTATCTGCCGATTATGGTGGTCGCTGCTCTTGACGCCCTGCTGGGTGCCGCGCGAGCCTATTTCGAGCGCAGCTTCTCCG
ACCGTGTGTTTGTGATCTCCTTCCTCGCCAACGTGGTGACGGCAACACTGCTCGTGTTCCTCGGCAACCAGCTCGGCGTC
GGTTCGCAGCTGCAGACAGCCGTCATCGTCGTACTCGGCATCCGCATCTTCTCCAACGTGTCCGCGATCAGACGCTTCAT
CTTCCGAGGCTGA

Upstream 100 bases:

>100_bases
TCAAGGAAGCCGGTATCTACCCGCAGGTGAGCAAATCCAATTCGATTACACTTGAGGCAGCAGTCACTGGCGAAGTGAAG
TACGCGGAAAGGAATGAATA

Downstream 100 bases:

>100_bases
CAAGGGTACTGACGTATGGCACGTAAAGCACAATCAGACAACATGCTGGAGAAAATGCGCGACCAGCATGTACAAGACAA
GGTCAACGACCGGATGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAAVLGLIIGVVIGVFVKPDIPIIVQPYLPIMVVAALDALLGAARAYFERSFSDRVFVISFLANVVTATLLVFLGNQLGV
GSQLQTAVIVVLGIRIFSNVSAIRRFIFRG

Sequences:

>Translated_110_residues
MAAVLGLIIGVVIGVFVKPDIPIIVQPYLPIMVVAALDALLGAARAYFERSFSDRVFVISFLANVVTATLLVFLGNQLGV
GSQLQTAVIVVLGIRIFSNVSAIRRFIFRG
>Mature_109_residues
AAVLGLIIGVVIGVFVKPDIPIIVQPYLPIMVVAALDALLGAARAYFERSFSDRVFVISFLANVVTATLLVFLGNQLGVG
SQLQTAVIVVLGIRIFSNVSAIRRFIFRG

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 11789; Mature: 11658

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVLGLIIGVVIGVFVKPDIPIIVQPYLPIMVVAALDALLGAARAYFERSFSDRVFVIS
CHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLANVVTATLLVFLGNQLGVGSQLQTAVIVVLGIRIFSNVSAIRRFIFRG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAVLGLIIGVVIGVFVKPDIPIIVQPYLPIMVVAALDALLGAARAYFERSFSDRVFVIS
HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLANVVTATLLVFLGNQLGVGSQLQTAVIVVLGIRIFSNVSAIRRFIFRG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]