| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692238
Identifier: 213692238
GI number: 213692238
Start: 1528756
End: 1529949
Strand: Direct
Name: 213692238
Synonym: Blon_1358
Alternate gene names: NA
Gene position: 1528756-1529949 (Clockwise)
Preceding gene: 213692237
Following gene: 213692252
Centisome position: 53.97
GC content: 56.53
Gene sequence:
>1194_bases ATGAGAAAGGTTCTACGACTCGCGTGGTTTGAGCGAACGCATACGTTCAGAACATCGCGGGCGTTGGTTGTCATGCTGGC GATCGTTGTCGCCGTATGCTATTGCCTTCAGGGTTTTGTGGTCAGTGCGGTTCGGTCCCATGCAAGCAATGTCGAGAAGC ACTCCAACGTATCCGTCATCGAGCTCAGCACGATTCGTCCGGACGCACGCGTCTTGGACGGGGAATCACTTTCCGAAGTA TCCGGACTGGGGCATGTCGTTTCCGTGGTTCCATGGATGCAGCACGATCTGGATTTGGCCGACGAAGGCGACTGGCCATC TCCAACGGTCAGCCCCGGATCGCTGTGGGCCACCACGTATTTCGAACCGAGGCTTCCGAAAATGATCAAGGGAGACAGGC CCGTCTCCCTGCAGGACGACGAGATTCTCCTACCCGATTCCGTTCCCGGAGGCAGCCTCAGGCATCTGTACGGCAAGACC GTCATGTTCGGGTACACGCATATCAACGGTAAATATCAAGGATCGTATAGAACCATTCCACTCAAGGTGGTGGGAATCTA CGACAACTCCGTACCCGACAAGGATGGCGAGAATCCGTCCTATGTCTCCGAAAACACAATGGATGCCCTGTTCGACGGGA ATGTCCAGGAATCATACACATTCGCATACGTTCAAGTCGATTCGGGCGATAATGTCCCCTTGGTCCAGAAGAAACTCGCC GCCATGGGATTCGGGGTGGCCGGTGCCGCGGGGCAGCAGGATGTCACGGGCATTCTTGCCGCACTTATGAGCATAGGCAG GTTCATGTTCCCCATTGTGCTTGTGTGCTCCCTGGTGTTCGGCTTATTTCTGAGCGTGATATGGATGAAGCAGCGCAAAC GTTCGTTGGCGCTGCTCCGATGCCTTGGATACACGGCCGGGCAACTGAGCGCCCTTGCACTCGTCCAAGTCGTCCAACTT GTCGTCGCAGCGGGCATCGCGGGCATCATCTTGGGGGCGGGTTTCAGTTTGCTGCTGGCGCATTCCGTTGATTCCGGCGA TCTGTTGAATCTCACGAATCTGGATTCGGTGGTTTTCGATCCGGTACTGGCGCTTGAAATGCTCGCCATCACCGTCGCTG GTGCAGTCATCGGGGCCCTTCCCCTGAGCGTAAGGATTGCACACACCCAGCCGGATGAGCTGATGCGCGGGTAG
Upstream 100 bases:
>100_bases AAAGGGGTGTGGCGATTTTGCTGGCCAGCCACGATCCTCGTCTGGATGGGTTGGAGTCCCAATCGCTGCGTCTTGAGGCC GGGAAGGTGGTTGTGAGCTG
Downstream 100 bases:
>100_bases TTCAGTACTCGGCTTTTATGGCGGTGATGGTGAGCTTGTCTGATTAATTCCAATACTATGAGGCATAGTTAAATGACGAT ACCGATATATGTCATGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRKVLRLAWFERTHTFRTSRALVVMLAIVVAVCYCLQGFVVSAVRSHASNVEKHSNVSVIELSTIRPDARVLDGESLSEV SGLGHVVSVVPWMQHDLDLADEGDWPSPTVSPGSLWATTYFEPRLPKMIKGDRPVSLQDDEILLPDSVPGGSLRHLYGKT VMFGYTHINGKYQGSYRTIPLKVVGIYDNSVPDKDGENPSYVSENTMDALFDGNVQESYTFAYVQVDSGDNVPLVQKKLA AMGFGVAGAAGQQDVTGILAALMSIGRFMFPIVLVCSLVFGLFLSVIWMKQRKRSLALLRCLGYTAGQLSALALVQVVQL VVAAGIAGIILGAGFSLLLAHSVDSGDLLNLTNLDSVVFDPVLALEMLAITVAGAVIGALPLSVRIAHTQPDELMRG
Sequences:
>Translated_397_residues MRKVLRLAWFERTHTFRTSRALVVMLAIVVAVCYCLQGFVVSAVRSHASNVEKHSNVSVIELSTIRPDARVLDGESLSEV SGLGHVVSVVPWMQHDLDLADEGDWPSPTVSPGSLWATTYFEPRLPKMIKGDRPVSLQDDEILLPDSVPGGSLRHLYGKT VMFGYTHINGKYQGSYRTIPLKVVGIYDNSVPDKDGENPSYVSENTMDALFDGNVQESYTFAYVQVDSGDNVPLVQKKLA AMGFGVAGAAGQQDVTGILAALMSIGRFMFPIVLVCSLVFGLFLSVIWMKQRKRSLALLRCLGYTAGQLSALALVQVVQL VVAAGIAGIILGAGFSLLLAHSVDSGDLLNLTNLDSVVFDPVLALEMLAITVAGAVIGALPLSVRIAHTQPDELMRG >Mature_397_residues MRKVLRLAWFERTHTFRTSRALVVMLAIVVAVCYCLQGFVVSAVRSHASNVEKHSNVSVIELSTIRPDARVLDGESLSEV SGLGHVVSVVPWMQHDLDLADEGDWPSPTVSPGSLWATTYFEPRLPKMIKGDRPVSLQDDEILLPDSVPGGSLRHLYGKT VMFGYTHINGKYQGSYRTIPLKVVGIYDNSVPDKDGENPSYVSENTMDALFDGNVQESYTFAYVQVDSGDNVPLVQKKLA AMGFGVAGAAGQQDVTGILAALMSIGRFMFPIVLVCSLVFGLFLSVIWMKQRKRSLALLRCLGYTAGQLSALALVQVVQL VVAAGIAGIILGAGFSLLLAHSVDSGDLLNLTNLDSVVFDPVLALEMLAITVAGAVIGALPLSVRIAHTQPDELMRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42814; Mature: 42814
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLRLAWFERTHTFRTSRALVVMLAIVVAVCYCLQGFVVSAVRSHASNVEKHSNVSVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELSTIRPDARVLDGESLSEVSGLGHVVSVVPWMQHDLDLADEGDWPSPTVSPGSLWATTY EEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC FEPRLPKMIKGDRPVSLQDDEILLPDSVPGGSLRHLYGKTVMFGYTHINGKYQGSYRTIP CCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHCCEEEEEEEEECCEECCCEEEEE LKVVGIYDNSVPDKDGENPSYVSENTMDALFDGNVQESYTFAYVQVDSGDNVPLVQKKLA EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHH AMGFGVAGAAGQQDVTGILAALMSIGRFMFPIVLVCSLVFGLFLSVIWMKQRKRSLALLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLGYTAGQLSALALVQVVQLVVAAGIAGIILGAGFSLLLAHSVDSGDLLNLTNLDSVVFD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCEEECCCCHHHHHH PVLALEMLAITVAGAVIGALPLSVRIAHTQPDELMRG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCC >Mature Secondary Structure MRKVLRLAWFERTHTFRTSRALVVMLAIVVAVCYCLQGFVVSAVRSHASNVEKHSNVSVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELSTIRPDARVLDGESLSEVSGLGHVVSVVPWMQHDLDLADEGDWPSPTVSPGSLWATTY EEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC FEPRLPKMIKGDRPVSLQDDEILLPDSVPGGSLRHLYGKTVMFGYTHINGKYQGSYRTIP CCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHCCEEEEEEEEECCEECCCEEEEE LKVVGIYDNSVPDKDGENPSYVSENTMDALFDGNVQESYTFAYVQVDSGDNVPLVQKKLA EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHH AMGFGVAGAAGQQDVTGILAALMSIGRFMFPIVLVCSLVFGLFLSVIWMKQRKRSLALLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLGYTAGQLSALALVQVVQLVVAAGIAGIILGAGFSLLLAHSVDSGDLLNLTNLDSVVFD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCEEECCCCHHHHHH PVLALEMLAITVAGAVIGALPLSVRIAHTQPDELMRG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA