| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692220
Identifier: 213692220
GI number: 213692220
Start: 1513910
End: 1514341
Strand: Direct
Name: 213692220
Synonym: Blon_1340
Alternate gene names: NA
Gene position: 1513910-1514341 (Clockwise)
Preceding gene: 213692217
Following gene: 213692221
Centisome position: 53.44
GC content: 62.27
Gene sequence:
>432_bases ATGCCGGTCTGGCCGATTGCGGTACGCCGATGGAAGAGCGAGGAGGTTGATCGTCCGCTCGACGACGCGACCGATTCCAC GTGCGACCTGTACTCCCCGGTATGCAAGCTGCACGCCAGACGTGACGTGATACCGATGACGGAGATCCTGAAGGCGTTGC GAGGCCAGGTCGGCCATCATCGTGCGTCCGACGGCGATGATCTGGAATCCCGCCTGCACGAGGCGATGTTCGACTGGATG CTTGACGTGGGCGTCTGGACGCCCGGGGATGTGATCCCCGTTGAGGTGACAGGCTGGGAGGAGACGCCGGACACGGTCAG GATACTCGCGCTTTCCGTCGACGGGATGTCATGCGAGGCCGTGTACAAGGGCCGGCTGGACGGTTTTCTTCGCGAACGCA TATCAGGGATGGGAAAGGAGCCGGAATCATGA
Upstream 100 bases:
>100_bases GAGCAGTCCGAGTTCAGTGAACCGTATGATCCCCTTCTCATCCGCAAGGCGTTGGAGCCGGAACGTCTGACGGCCGGATG CGGCGCAGTGGTGTTTTCGG
Downstream 100 bases:
>100_bases GCAAGATCAGTGAATCATTGCCGTATGATCTGAATATTATCGCCGCCCAATGCGACCCGTTGACCCTGCGGCTCGGCACG GCCGGCGTATCCCGCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPVWPIAVRRWKSEEVDRPLDDATDSTCDLYSPVCKLHARRDVIPMTEILKALRGQVGHHRASDGDDLESRLHEAMFDWM LDVGVWTPGDVIPVEVTGWEETPDTVRILALSVDGMSCEAVYKGRLDGFLRERISGMGKEPES
Sequences:
>Translated_143_residues MPVWPIAVRRWKSEEVDRPLDDATDSTCDLYSPVCKLHARRDVIPMTEILKALRGQVGHHRASDGDDLESRLHEAMFDWM LDVGVWTPGDVIPVEVTGWEETPDTVRILALSVDGMSCEAVYKGRLDGFLRERISGMGKEPES >Mature_142_residues PVWPIAVRRWKSEEVDRPLDDATDSTCDLYSPVCKLHARRDVIPMTEILKALRGQVGHHRASDGDDLESRLHEAMFDWML DVGVWTPGDVIPVEVTGWEETPDTVRILALSVDGMSCEAVYKGRLDGFLRERISGMGKEPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16120; Mature: 15989
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVWPIAVRRWKSEEVDRPLDDATDSTCDLYSPVCKLHARRDVIPMTEILKALRGQVGHH CCCCHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC RASDGDDLESRLHEAMFDWMLDVGVWTPGDVIPVEVTGWEETPDTVRILALSVDGMSCEA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHH VYKGRLDGFLRERISGMGKEPES HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVWPIAVRRWKSEEVDRPLDDATDSTCDLYSPVCKLHARRDVIPMTEILKALRGQVGHH CCCHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC RASDGDDLESRLHEAMFDWMLDVGVWTPGDVIPVEVTGWEETPDTVRILALSVDGMSCEA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHH VYKGRLDGFLRERISGMGKEPES HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA