| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692218
Identifier: 213692218
GI number: 213692218
Start: 1513055
End: 1513363
Strand: Reverse
Name: 213692218
Synonym: Blon_1338
Alternate gene names: NA
Gene position: 1513363-1513055 (Counterclockwise)
Preceding gene: 213692219
Following gene: 213692195
Centisome position: 53.42
GC content: 61.17
Gene sequence:
>309_bases ATGAGCTACACTCCGGAACAGTTCGCGGCCGACAGCGGAATCAGCCGCGAGGAAATCGATGCGGCGAAGAATCGCCTTCT CGAAGAGGTTCGCCTGTACGAGCTGAAGGAGGCCCGCAAGCGGCAGGACGTGACTCAGAAGCAGCTCGCCGAACGCATGG GCGTCAGCCAGAAGCGGGTCAGCAGCCTCGAATCCGGCGACGTCGACAAAACCGAAATCCGCACTTTGCGCAGATACCTC GACGCGATTGGAGGCAAGCTGCAGGTCAATGCGGTCATGCCTGACGGCCGCACCCTGCAACTGGTCTGA
Upstream 100 bases:
>100_bases AGCAAAACAAATGGTCGAAATGGTACAAAACGGCCATACCGGAAGCGGAAGACCGGTATGAGGCGTGGCTTAAACAGAAC AACAAATGAAAGGAATCGAC
Downstream 100 bases:
>100_bases ACCGAAACGTTCCATCAAGCCACCGGCTTCCAGTCTGCGTACGGTTTGCCAGCCTTCATCCATGCCCGGTGGTTGATGCG ATGCCGTTTGGTCAGCCGGT
Product: transcriptional regulator, XRE family
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Xre Family xin-Antitoxin System Antitoxin Component
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSYTPEQFAADSGISREEIDAAKNRLLEEVRLYELKEARKRQDVTQKQLAERMGVSQKRVSSLESGDVDKTEIRTLRRYL DAIGGKLQVNAVMPDGRTLQLV
Sequences:
>Translated_102_residues MSYTPEQFAADSGISREEIDAAKNRLLEEVRLYELKEARKRQDVTQKQLAERMGVSQKRVSSLESGDVDKTEIRTLRRYL DAIGGKLQVNAVMPDGRTLQLV >Mature_101_residues SYTPEQFAADSGISREEIDAAKNRLLEEVRLYELKEARKRQDVTQKQLAERMGVSQKRVSSLESGDVDKTEIRTLRRYLD AIGGKLQVNAVMPDGRTLQLV
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11596; Mature: 11465
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTPEQFAADSGISREEIDAAKNRLLEEVRLYELKEARKRQDVTQKQLAERMGVSQKRV CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SSLESGDVDKTEIRTLRRYLDAIGGKLQVNAVMPDGRTLQLV HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECC >Mature Secondary Structure SYTPEQFAADSGISREEIDAAKNRLLEEVRLYELKEARKRQDVTQKQLAERMGVSQKRV CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SSLESGDVDKTEIRTLRRYLDAIGGKLQVNAVMPDGRTLQLV HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA