| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692200
Identifier: 213692200
GI number: 213692200
Start: 1502253
End: 1503302
Strand: Direct
Name: 213692200
Synonym: Blon_1320
Alternate gene names: NA
Gene position: 1502253-1503302 (Clockwise)
Preceding gene: 213692199
Following gene: 213692201
Centisome position: 53.03
GC content: 66.95
Gene sequence:
>1050_bases TTGACCGGCTGGCTCATCGACATCAACCCCCGGGAATGCCCGCCCGACGTGATGGACGCGCCGGAAGCGTACCGCGCCGC ATGGGAACGGCATGTAGGCGAGGCCGTGCCGGGCGACGGCGATCCGGAGGATTGGCGCGAACAGGCGGCGCGCCTGGAAG CCGCCGTCCGTGTTCTCCCCGACCCCCATGTGCGGGTGGCGGGCCGGCCGTACGAGGGGCCGGATCCGATGACGCTCGCC CACTACGGCACGGTCATGCTCCGACCGTATATGGATCAGCTTTCCCTGCCGCCGTCGAATGCGGACAGGTATGACCTCAT GCCCGCGCTGCGCCCGCATCTGGGGCGCGACGCGCGATCGGTCGCCTGTGACGGGGACATGATCGACACGGCGGTGCATG GCATGCTCGACCGGCATCCCGGTTCGGGCGTGGTCGTCAAGTTCATGCTCAGGGACAAACGGCTGCCGCTCGCGTTCATC GACCCGGACGGCACGTTCATGCAATCGGATGAATACGGCGGGAGGCCGGAGCGCATCCCGTTCGCCGCCTGGCGTTGGGC GGGCTATGACCTCGCCCTGTTCGAGGGCGAGCCGGACGCGGTGCTCGTCCAGCAAAAGACGCGCATGCGATACGAATACC GGATACACGTGATCGGCGGCCAGCCGGCGTGCGGGGCGGGCTGCGTCGAACGGTTCACGCCCGCCGACAACACGGGCGAA CGGTACGATCCGCGCATGGAGGAGACCCGCAACAATGGGCGCATCGAATCGCATCCCGACATCGCACGGTTGTATGAGGC GTTCGCGCACGAGGTCGCGCACGCGATACGCGATGAGGTGTCCGGCCCGTACGTCATCGACCTGTATCTGGATGATGCCG GGCGGCCCCACGTGATTGAACTGAACGGACAGTCGAACAGCGGGCTGTACGCGCTCGACATGGACGCATTGCTGACGGCG GTCGGGGATAATCCGGCTCAGTTCATGCCCGACCCGAAACGGACGGCGACGCCCGGCTGCCTGGGAGTCAGGGAGGAGAA GACGATCTGA
Upstream 100 bases:
>100_bases TGGCGCCCGCCGAACGCTCCGCCTATTACGGGCAGACGGTGCCGAAAGGGAAGCGCCGGCCGATGGTGGAGAACTGGATA CCCGAACTGGAAGGAAAACG
Downstream 100 bases:
>100_bases TGGTATCCGAGGTGCAACGCATTCAGAACCGCAGCGGACTTGGCTCTACGCAGATGGCCCGGCTGTTGGGCGTCAGCATC AGGATGCTCGTTAGGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTGWLIDINPRECPPDVMDAPEAYRAAWERHVGEAVPGDGDPEDWREQAARLEAAVRVLPDPHVRVAGRPYEGPDPMTLA HYGTVMLRPYMDQLSLPPSNADRYDLMPALRPHLGRDARSVACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFI DPDGTFMQSDEYGGRPERIPFAAWRWAGYDLALFEGEPDAVLVQQKTRMRYEYRIHVIGGQPACGAGCVERFTPADNTGE RYDPRMEETRNNGRIESHPDIARLYEAFAHEVAHAIRDEVSGPYVIDLYLDDAGRPHVIELNGQSNSGLYALDMDALLTA VGDNPAQFMPDPKRTATPGCLGVREEKTI
Sequences:
>Translated_349_residues MTGWLIDINPRECPPDVMDAPEAYRAAWERHVGEAVPGDGDPEDWREQAARLEAAVRVLPDPHVRVAGRPYEGPDPMTLA HYGTVMLRPYMDQLSLPPSNADRYDLMPALRPHLGRDARSVACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFI DPDGTFMQSDEYGGRPERIPFAAWRWAGYDLALFEGEPDAVLVQQKTRMRYEYRIHVIGGQPACGAGCVERFTPADNTGE RYDPRMEETRNNGRIESHPDIARLYEAFAHEVAHAIRDEVSGPYVIDLYLDDAGRPHVIELNGQSNSGLYALDMDALLTA VGDNPAQFMPDPKRTATPGCLGVREEKTI >Mature_348_residues TGWLIDINPRECPPDVMDAPEAYRAAWERHVGEAVPGDGDPEDWREQAARLEAAVRVLPDPHVRVAGRPYEGPDPMTLAH YGTVMLRPYMDQLSLPPSNADRYDLMPALRPHLGRDARSVACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFID PDGTFMQSDEYGGRPERIPFAAWRWAGYDLALFEGEPDAVLVQQKTRMRYEYRIHVIGGQPACGAGCVERFTPADNTGER YDPRMEETRNNGRIESHPDIARLYEAFAHEVAHAIRDEVSGPYVIDLYLDDAGRPHVIELNGQSNSGLYALDMDALLTAV GDNPAQFMPDPKRTATPGCLGVREEKTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38915; Mature: 38784
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWLIDINPRECPPDVMDAPEAYRAAWERHVGEAVPGDGDPEDWREQAARLEAAVRVLP CCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC DPHVRVAGRPYEGPDPMTLAHYGTVMLRPYMDQLSLPPSNADRYDLMPALRPHLGRDARS CCCEEECCCCCCCCCCEEEHHCCEEEEECHHHHCCCCCCCCCCHHCCHHHHHHCCCCCCE VACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFIDPDGTFMQSDEYGGRPERIP EECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCC FAAWRWAGYDLALFEGEPDAVLVQQKTRMRYEYRIHVIGGQPACGAGCVERFTPADNTGE EEEEEECCCEEEEECCCCCEEEEEHHHCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCC RYDPRMEETRNNGRIESHPDIARLYEAFAHEVAHAIRDEVSGPYVIDLYLDDAGRPHVIE CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEE LNGQSNSGLYALDMDALLTAVGDNPAQFMPDPKRTATPGCLGVREEKTI ECCCCCCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGWLIDINPRECPPDVMDAPEAYRAAWERHVGEAVPGDGDPEDWREQAARLEAAVRVLP CCEEEECCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC DPHVRVAGRPYEGPDPMTLAHYGTVMLRPYMDQLSLPPSNADRYDLMPALRPHLGRDARS CCCEEECCCCCCCCCCEEEHHCCEEEEECHHHHCCCCCCCCCCHHCCHHHHHHCCCCCCE VACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFIDPDGTFMQSDEYGGRPERIP EECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCC FAAWRWAGYDLALFEGEPDAVLVQQKTRMRYEYRIHVIGGQPACGAGCVERFTPADNTGE EEEEEECCCEEEEECCCCCEEEEEHHHCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCC RYDPRMEETRNNGRIESHPDIARLYEAFAHEVAHAIRDEVSGPYVIDLYLDDAGRPHVIE CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEE LNGQSNSGLYALDMDALLTAVGDNPAQFMPDPKRTATPGCLGVREEKTI ECCCCCCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA