| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692172
Identifier: 213692172
GI number: 213692172
Start: 1483369
End: 1483905
Strand: Direct
Name: 213692172
Synonym: Blon_1292
Alternate gene names: NA
Gene position: 1483369-1483905 (Clockwise)
Preceding gene: 213692171
Following gene: 213692173
Centisome position: 52.37
GC content: 60.89
Gene sequence:
>537_bases ATGCGTTGCCGAATCTGTGACGGATTGCCGCCGGAACACCGGCCTTACGTCGTCTGGCACACCGGCTGTGACGGTTGCGA GGAACACGACCGGGATTATTACGACGAAGGTGTCGTCGTATGCGCCGACTGCATCGAAGCGTTGCGATACGCCGGTATCG GGCTTGATGGGGACGCGTGCGTAATCGACCTGCAATGCTCGTTGGACATGTGGGCGCAGGATACGCTCTGGTACGCCTTC TGGACGCCGGAGCGTGTGACCGTATGCGAAGCTGACTGCGCCCGCCGTTATCTGGACCGTTCCGGGAACAAGGATGTGGA CCCCGCATGGGATTGGCTGCCAAAAGGCACATGGTCCGATGTGGACGAGTTCAAGGCCGATTTGGGTTCCGCCCTATGCC GTCGTTTCCTGACCGACGACATGGACGGGCTTGCCGCCGCGTATCTGAAACAAGGCGATGGCTGGGTGTCCACCAGCACG CAAGACGTACGGAAGCTTGCCGAACGGCTGGGCGGGGACGCATATCGGCGGATATGA
Upstream 100 bases:
>100_bases GGCCTCGAAGAGGGGTCCGGATGGGGAAAACACCGCCGAACCCGCCCGACAAACATTGAGGCAATACGTACACTGCGAAT AACCTTGGAGGACTTGGAAA
Downstream 100 bases:
>100_bases GCGAAGAACCATTCTGACGGCATGTTTCGCCCATCGAACTGGCTGGACGCAAATACCGCGCCGTCACAGACAAAGCCGCA CTCAACTGAACGAGACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRCRICDGLPPEHRPYVVWHTGCDGCEEHDRDYYDEGVVVCADCIEALRYAGIGLDGDACVIDLQCSLDMWAQDTLWYAF WTPERVTVCEADCARRYLDRSGNKDVDPAWDWLPKGTWSDVDEFKADLGSALCRRFLTDDMDGLAAAYLKQGDGWVSTST QDVRKLAERLGGDAYRRI
Sequences:
>Translated_178_residues MRCRICDGLPPEHRPYVVWHTGCDGCEEHDRDYYDEGVVVCADCIEALRYAGIGLDGDACVIDLQCSLDMWAQDTLWYAF WTPERVTVCEADCARRYLDRSGNKDVDPAWDWLPKGTWSDVDEFKADLGSALCRRFLTDDMDGLAAAYLKQGDGWVSTST QDVRKLAERLGGDAYRRI >Mature_178_residues MRCRICDGLPPEHRPYVVWHTGCDGCEEHDRDYYDEGVVVCADCIEALRYAGIGLDGDACVIDLQCSLDMWAQDTLWYAF WTPERVTVCEADCARRYLDRSGNKDVDPAWDWLPKGTWSDVDEFKADLGSALCRRFLTDDMDGLAAAYLKQGDGWVSTST QDVRKLAERLGGDAYRRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20204; Mature: 20204
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCRICDGLPPEHRPYVVWHTGCDGCEEHDRDYYDEGVVVCADCIEALRYAGIGLDGDAC CCCCCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHCCEEHHHHHHHHHHHHCCCCCCCEE VIDLQCSLDMWAQDTLWYAFWTPERVTVCEADCARRYLDRSGNKDVDPAWDWLPKGTWSD EEEEECCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC VDEFKADLGSALCRRFLTDDMDGLAAAYLKQGDGWVSTSTQDVRKLAERLGGDAYRRI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MRCRICDGLPPEHRPYVVWHTGCDGCEEHDRDYYDEGVVVCADCIEALRYAGIGLDGDAC CCCCCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHCCEEHHHHHHHHHHHHCCCCCCCEE VIDLQCSLDMWAQDTLWYAFWTPERVTVCEADCARRYLDRSGNKDVDPAWDWLPKGTWSD EEEEECCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC VDEFKADLGSALCRRFLTDDMDGLAAAYLKQGDGWVSTSTQDVRKLAERLGGDAYRRI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA