| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692165
Identifier: 213692165
GI number: 213692165
Start: 1479903
End: 1480409
Strand: Direct
Name: 213692165
Synonym: Blon_1285
Alternate gene names: NA
Gene position: 1479903-1480409 (Clockwise)
Preceding gene: 213692164
Following gene: 213692166
Centisome position: 52.24
GC content: 64.69
Gene sequence:
>507_bases ATGACAGGCATCGAACCATACGACTGGTCGGAGATGACGCCCGACATGCTGCTCGCCCACATGGCCGGACTGGCCATCCT CCAGAAGAAGATCACGAAGGCGCTGGACGGGGCGAAACGCCAGTATCTTCGCACGCATGACGCGGACAGTCCGAGGGAGA ACGCGGTGTTCGCCGGCCTCGACGCGGCCACCGTGCTCGTGAAAAGGGACGGGGAAGGCTCCTACAAGGTGGACGATCCG CTCGCCTACGCGGACTTCCTCAGCCACTACGGACTGGACTGCGAGGGACAGCCGGCCGTCATCACCGTCAACTACCCGAC CCCGAACGCCATGGGCGAACGTTTCCTCGAACGTCTCATCCGCGAACACGGGGGAGAGATACCGGACGGCGTGAAATACC AGCCGGGCCGGTCCGGCGGCGTGACCGTCACCCTCGGCAAGGGAATCGCCGAACATGCGTTCGACTCGGCGGAACTGTCG CGCCTCGCCATCGAAGCCGCCGTCTGA
Upstream 100 bases:
>100_bases TTCCGGCCATACGGGCGCGTATGCGTCACGGACGGGGACGCATACGCGGTTTTGGAACACAGGCCCGCGCATCGTGCGCG GGACGGAAAGGAACCAACCC
Downstream 100 bases:
>100_bases ACAGGCGCATAGCAACCCGGCAAACGAAAGGAAAACCATTCCATGCCACGCAGGAACCTTGAGAAAAACCAGCCCCGCCC GTTGAAGGCCGACGCCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTGIEPYDWSEMTPDMLLAHMAGLAILQKKITKALDGAKRQYLRTHDADSPRENAVFAGLDAATVLVKRDGEGSYKVDDP LAYADFLSHYGLDCEGQPAVITVNYPTPNAMGERFLERLIREHGGEIPDGVKYQPGRSGGVTVTLGKGIAEHAFDSAELS RLAIEAAV
Sequences:
>Translated_168_residues MTGIEPYDWSEMTPDMLLAHMAGLAILQKKITKALDGAKRQYLRTHDADSPRENAVFAGLDAATVLVKRDGEGSYKVDDP LAYADFLSHYGLDCEGQPAVITVNYPTPNAMGERFLERLIREHGGEIPDGVKYQPGRSGGVTVTLGKGIAEHAFDSAELS RLAIEAAV >Mature_167_residues TGIEPYDWSEMTPDMLLAHMAGLAILQKKITKALDGAKRQYLRTHDADSPRENAVFAGLDAATVLVKRDGEGSYKVDDPL AYADFLSHYGLDCEGQPAVITVNYPTPNAMGERFLERLIREHGGEIPDGVKYQPGRSGGVTVTLGKGIAEHAFDSAELSR LAIEAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18204; Mature: 18073
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIEPYDWSEMTPDMLLAHMAGLAILQKKITKALDGAKRQYLRTHDADSPRENAVFAGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC DAATVLVKRDGEGSYKVDDPLAYADFLSHYGLDCEGQPAVITVNYPTPNAMGERFLERLI CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH REHGGEIPDGVKYQPGRSGGVTVTLGKGIAEHAFDSAELSRLAIEAAV HHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TGIEPYDWSEMTPDMLLAHMAGLAILQKKITKALDGAKRQYLRTHDADSPRENAVFAGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC DAATVLVKRDGEGSYKVDDPLAYADFLSHYGLDCEGQPAVITVNYPTPNAMGERFLERLI CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH REHGGEIPDGVKYQPGRSGGVTVTLGKGIAEHAFDSAELSRLAIEAAV HHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA