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The map label for this gene is 213692119

Identifier: 213692119

GI number: 213692119

Start: 1421748

End: 1423196

Strand: Direct

Name: 213692119

Synonym: Blon_1239

Alternate gene names: NA

Gene position: 1421748-1423196 (Clockwise)

Preceding gene: 213692113

Following gene: 213692121

Centisome position: 50.19

GC content: 71.08

Gene sequence:

>1449_bases
ATGATCGTATGCATCCCGTCACGCATACAGATGCATACAGCCCGGCCGGAATGCATACACGGCCCGGAGCCCGACGGACG
CATACCCCGGCGCATGACCGAAGACCTCATATTCGACGCGAAGGCGCTCGCCATGCTGTCCGAACCCCAGGGCGTCTCGT
TCCTGACCGGCAAGGCGGGCACGGGCAAAAGCACCCTCGTCAACCATTGGCGAAGCACGCTCGCGCCGCGCAACACGCTC
ACCCTCGCGCCCACCGGCATCGCCGCCCTCAACGTGAACGGGACCACCATCCACCGGTTCATCCACGCCAAGCCCGGCGT
CACCCCCGCCGAGGCGGCCCGCAAGGGACGCGAGAACGCCCGCGACCCCCTCTACCGGATGCTGGGCGCGATCGTGATCG
ACGAGGTCAGCATGGTGCGCGCCGACCTCATGGACTGCCTCGACCGGTTCCTCCAAGGCGCACGCGGCGACGGGCGGCCG
TTCGGCGGCCTCAGGACCATACTGGTCGGCGACCTCGCCCAACTGCCGCCCGTCGTCGACGAACGCCGGGAAGACGCCGC
GTTCCGGCCCGGCGGCCAATGGGACGGCCCCTGGTTCTTCCAATCCCACGCGATCGCCCGCCTGCTCGACAAGGGACTGC
TCGCCGGCGTCGCGCTCGCCCGGGTGCACCGACAGTCCGACCCCGTGTTCGTCAACGCGTTGAACGCGTTGCGCGACGGG
ACGCCCGGACCGGCCGCGCTCGCCGCGATCAACCAACGGACGGGAGCCCCCTGGACGCCCGGGGGGAGCGTCGTCCTGTG
CGCGGCCAACCGGCGGGCCGACGCCATCAACAAGGCGATGCTCGACCGTCTGCCCGCCCCGCCCATGCGCTTCGCCGCCC
GGACGGGCGGCGAATGGAACCGGACCCTGGAGCCCGCGCCCCGCCTGCTCGACGTGAAGCCCGGCATGCGCGTCATGATG
CTGTCCAACGATCCGACGGGTTTGTGGGCGAACGGCACCATGGGCGTCCTCGAGCACGTGGACCCGACGGGTCCGGTCGC
GACCGTCCGCATGGACGACGGGACGGTCGCCGACGTGGGCGTCCACGCGTGGGAGATCGTCGTGCCGCGCATCGTCCGCG
ACCCCGACGAGCCCGACAAGCCCGGGCGTCTGGAGAACGTGACGGTCGGCTCCTACCGTCAGCTGCCGTTCAGGCCCGGC
TGGGCGGTCACCATCCACAAGAGCCAGGGCAAGACGTTCGACCGGGTGCGGCTCGAGCTCGGCCCACGCCCCCTGTTCGC
CGCCGGGCAGGCGTACGTCGCGTTGAGCCGGTGCACGTCCCTGGCCGGCCTGAGCCTCGACCGGCCGCTCACGGCACGCG
ACGTGAAGGCCGATCCGGCGGTCAAAGGCTTCATGGGCCGGCTCGCCCGTCCCAGGCCGCCCATGCCCGTGCAGGACAGC
CTGTTCTGA

Upstream 100 bases:

>100_bases
TTTTCCTTTCCTTCAATCCTCTATAAGGGAATGATGCATACAATGCATACACGGCTCCGGACCATCCCCGGAACGTTGGA
ACCAAGCCGATCCGAGAACT

Downstream 100 bases:

>100_bases
CCGGGATCGAAAACCCTGTCGGAAGTGGACACACTGCTCGAATACGCGACGGATCGCGAACTGGACATCCTCAAGGAGCG
TCCATGGAAGGCATCCCACA

Product: AAA ATPase

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; Exonuclease V Subunit Alpha; Helicase-Related Protein; ATPase; 5-3' DNA Helicase; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; HRDC Domain Protein; Helicase-Family Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; Helicase Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase; Helicase RecD/TraA Family

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MIVCIPSRIQMHTARPECIHGPEPDGRIPRRMTEDLIFDAKALAMLSEPQGVSFLTGKAGTGKSTLVNHWRSTLAPRNTL
TLAPTGIAALNVNGTTIHRFIHAKPGVTPAEAARKGRENARDPLYRMLGAIVIDEVSMVRADLMDCLDRFLQGARGDGRP
FGGLRTILVGDLAQLPPVVDERREDAAFRPGGQWDGPWFFQSHAIARLLDKGLLAGVALARVHRQSDPVFVNALNALRDG
TPGPAALAAINQRTGAPWTPGGSVVLCAANRRADAINKAMLDRLPAPPMRFAARTGGEWNRTLEPAPRLLDVKPGMRVMM
LSNDPTGLWANGTMGVLEHVDPTGPVATVRMDDGTVADVGVHAWEIVVPRIVRDPDEPDKPGRLENVTVGSYRQLPFRPG
WAVTIHKSQGKTFDRVRLELGPRPLFAAGQAYVALSRCTSLAGLSLDRPLTARDVKADPAVKGFMGRLARPRPPMPVQDS
LF

Sequences:

>Translated_482_residues
MIVCIPSRIQMHTARPECIHGPEPDGRIPRRMTEDLIFDAKALAMLSEPQGVSFLTGKAGTGKSTLVNHWRSTLAPRNTL
TLAPTGIAALNVNGTTIHRFIHAKPGVTPAEAARKGRENARDPLYRMLGAIVIDEVSMVRADLMDCLDRFLQGARGDGRP
FGGLRTILVGDLAQLPPVVDERREDAAFRPGGQWDGPWFFQSHAIARLLDKGLLAGVALARVHRQSDPVFVNALNALRDG
TPGPAALAAINQRTGAPWTPGGSVVLCAANRRADAINKAMLDRLPAPPMRFAARTGGEWNRTLEPAPRLLDVKPGMRVMM
LSNDPTGLWANGTMGVLEHVDPTGPVATVRMDDGTVADVGVHAWEIVVPRIVRDPDEPDKPGRLENVTVGSYRQLPFRPG
WAVTIHKSQGKTFDRVRLELGPRPLFAAGQAYVALSRCTSLAGLSLDRPLTARDVKADPAVKGFMGRLARPRPPMPVQDS
LF
>Mature_482_residues
MIVCIPSRIQMHTARPECIHGPEPDGRIPRRMTEDLIFDAKALAMLSEPQGVSFLTGKAGTGKSTLVNHWRSTLAPRNTL
TLAPTGIAALNVNGTTIHRFIHAKPGVTPAEAARKGRENARDPLYRMLGAIVIDEVSMVRADLMDCLDRFLQGARGDGRP
FGGLRTILVGDLAQLPPVVDERREDAAFRPGGQWDGPWFFQSHAIARLLDKGLLAGVALARVHRQSDPVFVNALNALRDG
TPGPAALAAINQRTGAPWTPGGSVVLCAANRRADAINKAMLDRLPAPPMRFAARTGGEWNRTLEPAPRLLDVKPGMRVMM
LSNDPTGLWANGTMGVLEHVDPTGPVATVRMDDGTVADVGVHAWEIVVPRIVRDPDEPDKPGRLENVTVGSYRQLPFRPG
WAVTIHKSQGKTFDRVRLELGPRPLFAAGQAYVALSRCTSLAGLSLDRPLTARDVKADPAVKGFMGRLARPRPPMPVQDS
LF

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=466, Percent_Identity=32.618025751073, Blast_Score=165, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI25143421, Length=428, Percent_Identity=30.607476635514, Blast_Score=160, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321820, Length=491, Percent_Identity=26.2729124236253, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6323579, Length=323, Percent_Identity=31.2693498452012, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI19920652, Length=427, Percent_Identity=32.7868852459016, Blast_Score=169, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52236; Mature: 52236

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVCIPSRIQMHTARPECIHGPEPDGRIPRRMTEDLIFDAKALAMLSEPQGVSFLTGKAG
CEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
TGKSTLVNHWRSTLAPRNTLTLAPTGIAALNVNGTTIHRFIHAKPGVTPAEAARKGRENA
CCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCC
RDPLYRMLGAIVIDEVSMVRADLMDCLDRFLQGARGDGRPFGGLRTILVGDLAQLPPVVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
ERREDAAFRPGGQWDGPWFFQSHAIARLLDKGLLAGVALARVHRQSDPVFVNALNALRDG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCC
TPGPAALAAINQRTGAPWTPGGSVVLCAANRRADAINKAMLDRLPAPPMRFAARTGGEWN
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCC
RTLEPAPRLLDVKPGMRVMMLSNDPTGLWANGTMGVLEHVDPTGPVATVRMDDGTVADVG
CCCCCCCCEEECCCCCEEEEEECCCCCEECCCCHHHHHCCCCCCCEEEEEECCCCEECCC
VHAWEIVVPRIVRDPDEPDKPGRLENVTVGSYRQLPFRPGWAVTIHKSQGKTFDRVRLEL
CHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEECCCCCCCEEEEEECCCCCCEEEEEEEC
GPRPLFAAGQAYVALSRCTSLAGLSLDRPLTARDVKADPAVKGFMGRLARPRPPMPVQDS
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LF
CC
>Mature Secondary Structure
MIVCIPSRIQMHTARPECIHGPEPDGRIPRRMTEDLIFDAKALAMLSEPQGVSFLTGKAG
CEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
TGKSTLVNHWRSTLAPRNTLTLAPTGIAALNVNGTTIHRFIHAKPGVTPAEAARKGRENA
CCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCC
RDPLYRMLGAIVIDEVSMVRADLMDCLDRFLQGARGDGRPFGGLRTILVGDLAQLPPVVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
ERREDAAFRPGGQWDGPWFFQSHAIARLLDKGLLAGVALARVHRQSDPVFVNALNALRDG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCC
TPGPAALAAINQRTGAPWTPGGSVVLCAANRRADAINKAMLDRLPAPPMRFAARTGGEWN
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCC
RTLEPAPRLLDVKPGMRVMMLSNDPTGLWANGTMGVLEHVDPTGPVATVRMDDGTVADVG
CCCCCCCCEEECCCCCEEEEEECCCCCEECCCCHHHHHCCCCCCCEEEEEECCCCEECCC
VHAWEIVVPRIVRDPDEPDKPGRLENVTVGSYRQLPFRPGWAVTIHKSQGKTFDRVRLEL
CHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEECCCCCCCEEEEEECCCCCCEEEEEEEC
GPRPLFAAGQAYVALSRCTSLAGLSLDRPLTARDVKADPAVKGFMGRLARPRPPMPVQDS
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA