| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692114
Identifier: 213692114
GI number: 213692114
Start: 1418524
End: 1419207
Strand: Reverse
Name: 213692114
Synonym: Blon_1234
Alternate gene names: NA
Gene position: 1419207-1418524 (Counterclockwise)
Preceding gene: 213692115
Following gene: 213692111
Centisome position: 50.1
GC content: 69.15
Gene sequence:
>684_bases ATGGGCGGCATGACCGAACTCGAACTCATCGACCCGGGCGCCTGGCATTGGCGCGGCACCGACCCAATCCGCGGCATGGC GTTCCGGCTGCGTCTCGCCGGATGGCGAAACACGGGCCCCCACATGTGGACGGCCCCATGCGGCGACACGCTGACCGCAT GCCATCCCGGATTCCTCGTCCACAGGCATGCGGAAGGCGTCGGGGCACGCATCCCCTCCAAGGCGTTCCGCCCCTGGCAT GGCGGACGACATGGGATGCCCGTCGCAACATCCGTCGACGTGGATTGGCGTGAGCACGCCGCGCTCATCCTCGCCCGGGA CGCGCTCAAGGTCATGGAGGACGCGCTCGCCCGCCCATGCACGTCCGCGACGGCCGGCCAGATGACCCGTCTGAGGGTCA GATGCGAGCTCGCGGCACGCCTGTACCCGCCCGCCGATCCCGACGCATGGCGTGACGCGCACGGGCGGATGCTCGAATTG GAGAAAGCCGTCCGCGACTATACGGACGTGGAATGCGCCCCCTCCCCCGTGTTCCCGGCCCTGTCCTTCGCGGGCGGCAC GCTCCTGCCGATCGGCATGTTCATGCTCGGGCATCCCGGCATGGAGCGCACGGGCGCGACGCTGACGGGCATGGGCATCG GCCTGAACCTGCTCGCCTCCCTCATGGAACGACATGACGCATGA
Upstream 100 bases:
>100_bases TCTGGACGGCGACCCTCGCCCTGACGGGCCTGATCGCATGGCAGGCGTACACGGTGTGGACGGACCAGTTCCGCTGACCG CGTCGCGGGGGACCACCATC
Downstream 100 bases:
>100_bases TCCCGTCGGACCGTTGCATAAGGGTCGCGCCGACGGCATGCCAGCCGGTCCAGCCGACGTGGCCCGCCTACGCGCGGTCG CAGCCCGGATATGCCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGGMTELELIDPGAWHWRGTDPIRGMAFRLRLAGWRNTGPHMWTAPCGDTLTACHPGFLVHRHAEGVGARIPSKAFRPWH GGRHGMPVATSVDVDWREHAALILARDALKVMEDALARPCTSATAGQMTRLRVRCELAARLYPPADPDAWRDAHGRMLEL EKAVRDYTDVECAPSPVFPALSFAGGTLLPIGMFMLGHPGMERTGATLTGMGIGLNLLASLMERHDA
Sequences:
>Translated_227_residues MGGMTELELIDPGAWHWRGTDPIRGMAFRLRLAGWRNTGPHMWTAPCGDTLTACHPGFLVHRHAEGVGARIPSKAFRPWH GGRHGMPVATSVDVDWREHAALILARDALKVMEDALARPCTSATAGQMTRLRVRCELAARLYPPADPDAWRDAHGRMLEL EKAVRDYTDVECAPSPVFPALSFAGGTLLPIGMFMLGHPGMERTGATLTGMGIGLNLLASLMERHDA >Mature_226_residues GGMTELELIDPGAWHWRGTDPIRGMAFRLRLAGWRNTGPHMWTAPCGDTLTACHPGFLVHRHAEGVGARIPSKAFRPWHG GRHGMPVATSVDVDWREHAALILARDALKVMEDALARPCTSATAGQMTRLRVRCELAARLYPPADPDAWRDAHGRMLELE KAVRDYTDVECAPSPVFPALSFAGGTLLPIGMFMLGHPGMERTGATLTGMGIGLNLLASLMERHDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24762; Mature: 24631
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGMTELELIDPGAWHWRGTDPIRGMAFRLRLAGWRNTGPHMWTAPCGDTLTACHPGFLV CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHCCCCCEE HRHAEGVGARIPSKAFRPWHGGRHGMPVATSVDVDWREHAALILARDALKVMEDALARPC EECCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC TSATAGQMTRLRVRCELAARLYPPADPDAWRDAHGRMLELEKAVRDYTDVECAPSPVFPA CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCH LSFAGGTLLPIGMFMLGHPGMERTGATLTGMGIGLNLLASLMERHDA HHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure GGMTELELIDPGAWHWRGTDPIRGMAFRLRLAGWRNTGPHMWTAPCGDTLTACHPGFLV CCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHCCCCCEE HRHAEGVGARIPSKAFRPWHGGRHGMPVATSVDVDWREHAALILARDALKVMEDALARPC EECCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC TSATAGQMTRLRVRCELAARLYPPADPDAWRDAHGRMLELEKAVRDYTDVECAPSPVFPA CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCH LSFAGGTLLPIGMFMLGHPGMERTGATLTGMGIGLNLLASLMERHDA HHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA