| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692090
Identifier: 213692090
GI number: 213692090
Start: 1393700
End: 1394461
Strand: Direct
Name: 213692090
Synonym: Blon_1209
Alternate gene names: NA
Gene position: 1393700-1394461 (Clockwise)
Preceding gene: 213692089
Following gene: 213692091
Centisome position: 49.2
GC content: 72.44
Gene sequence:
>762_bases ATGAGCGAACACAACCCGTATCTCCTGTCCGACCCGCGACTGCTCGAAGCCAACCGGACCGACGTCGCCTACCAGCTGGG GCATGGCACGCCGCCCGGCTGGCTGCTCGCCCCCGGCACGGGCCCGCTGCCCATACCCGAACCCATGGCCGTCAGACCGG ATTCGCCGCGCACCATGGAACTGCTCGCCCTCCCGTTCGCATGGCTGCCCGACGAGATCTGGGCCCGCTACCCGCATGAG ACGGACCCTGGGTACGCGACCCGCATCACCGTCGCCCTGGACGCAATGGGCCTGCTCGCCGACACGGGGGACGGCGTCTG GTACGCGTCCGTGGAGGACACGCCATCGGACGCGGACACGGCGGCCCGCACGCTCGCAGCCCTCGACGGGGACGCGGACG ACGCGGGGACGATGCTGATCATGGAGCGGATGCGCGCGCGCATGCTGAAAGCCTGGCCCGGCGGGTATCCGGCCGGCGAG CAGATCGGGTTCGCCCGGCAGACGGCCGGCCTGGCGCTGACGGCCAATCTGGCGTTGACGGGCATGCGCGCCCTCGACAT GGACGCGCACGGCGACCGGGAGGGGGCGACGGGCGTGATCCGCGCGGCCATGCGCGTCTGGCCCGGCCTGTTCCCCGACC GGCCCGACCGGGACGCGCTCGCCGCATGGGTGTCGGACCTGCACGGGGACGCGGTCGCGGCGATGCGGCTCCTCCATCGC ATGGGGTTCGCGTCCGACACGGACATGGAGGCGTTGCGATGA
Upstream 100 bases:
>100_bases CCGAACAGCGGGGCGACATATCAGACGAGAGCAACGATCCGAACTACCGGCGGTTCCTCGCCGAACAGCGGGCGAACACG GCACGGCATAGGAGGGGCGC
Downstream 100 bases:
>100_bases GCCGCGAATCGGAGGACAGGGAACGCGACAGGTTCGCGTCGGACACGGACCGGTGGTCGCCATGGGCGGCCCTGATCGGC GTGGGCGGCCTGGCAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHE TDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGE QIGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR MGFASDTDMEALR
Sequences:
>Translated_253_residues MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHE TDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGE QIGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR MGFASDTDMEALR >Mature_252_residues SEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHET DPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQ IGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHRM GFASDTDMEALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27314; Mature: 27183
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTME CCCCCCEEECCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEE LLALPFAWLPDEIWARYPHETDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADT EEECCCHHCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHEECCCCEEEEECCCCCCCHHH AARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQIGFARQTAGLALTANLALT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEECHHHH GMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR CCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH MGFASDTDMEALR HCCCCCCCHHHCC >Mature Secondary Structure SEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTME CCCCCEEECCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEE LLALPFAWLPDEIWARYPHETDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADT EEECCCHHCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHEECCCCEEEEECCCCCCCHHH AARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQIGFARQTAGLALTANLALT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEECHHHH GMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR CCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH MGFASDTDMEALR HCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA