Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692090

Identifier: 213692090

GI number: 213692090

Start: 1393700

End: 1394461

Strand: Direct

Name: 213692090

Synonym: Blon_1209

Alternate gene names: NA

Gene position: 1393700-1394461 (Clockwise)

Preceding gene: 213692089

Following gene: 213692091

Centisome position: 49.2

GC content: 72.44

Gene sequence:

>762_bases
ATGAGCGAACACAACCCGTATCTCCTGTCCGACCCGCGACTGCTCGAAGCCAACCGGACCGACGTCGCCTACCAGCTGGG
GCATGGCACGCCGCCCGGCTGGCTGCTCGCCCCCGGCACGGGCCCGCTGCCCATACCCGAACCCATGGCCGTCAGACCGG
ATTCGCCGCGCACCATGGAACTGCTCGCCCTCCCGTTCGCATGGCTGCCCGACGAGATCTGGGCCCGCTACCCGCATGAG
ACGGACCCTGGGTACGCGACCCGCATCACCGTCGCCCTGGACGCAATGGGCCTGCTCGCCGACACGGGGGACGGCGTCTG
GTACGCGTCCGTGGAGGACACGCCATCGGACGCGGACACGGCGGCCCGCACGCTCGCAGCCCTCGACGGGGACGCGGACG
ACGCGGGGACGATGCTGATCATGGAGCGGATGCGCGCGCGCATGCTGAAAGCCTGGCCCGGCGGGTATCCGGCCGGCGAG
CAGATCGGGTTCGCCCGGCAGACGGCCGGCCTGGCGCTGACGGCCAATCTGGCGTTGACGGGCATGCGCGCCCTCGACAT
GGACGCGCACGGCGACCGGGAGGGGGCGACGGGCGTGATCCGCGCGGCCATGCGCGTCTGGCCCGGCCTGTTCCCCGACC
GGCCCGACCGGGACGCGCTCGCCGCATGGGTGTCGGACCTGCACGGGGACGCGGTCGCGGCGATGCGGCTCCTCCATCGC
ATGGGGTTCGCGTCCGACACGGACATGGAGGCGTTGCGATGA

Upstream 100 bases:

>100_bases
CCGAACAGCGGGGCGACATATCAGACGAGAGCAACGATCCGAACTACCGGCGGTTCCTCGCCGAACAGCGGGCGAACACG
GCACGGCATAGGAGGGGCGC

Downstream 100 bases:

>100_bases
GCCGCGAATCGGAGGACAGGGAACGCGACAGGTTCGCGTCGGACACGGACCGGTGGTCGCCATGGGCGGCCCTGATCGGC
GTGGGCGGCCTGGCAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHE
TDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGE
QIGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR
MGFASDTDMEALR

Sequences:

>Translated_253_residues
MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHE
TDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGE
QIGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR
MGFASDTDMEALR
>Mature_252_residues
SEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTMELLALPFAWLPDEIWARYPHET
DPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADTAARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQ
IGFARQTAGLALTANLALTGMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHRM
GFASDTDMEALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27314; Mature: 27183

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTME
CCCCCCEEECCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEE
LLALPFAWLPDEIWARYPHETDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADT
EEECCCHHCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHEECCCCEEEEECCCCCCCHHH
AARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQIGFARQTAGLALTANLALT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEECHHHH
GMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR
CCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
MGFASDTDMEALR
HCCCCCCCHHHCC
>Mature Secondary Structure 
SEHNPYLLSDPRLLEANRTDVAYQLGHGTPPGWLLAPGTGPLPIPEPMAVRPDSPRTME
CCCCCEEECCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEE
LLALPFAWLPDEIWARYPHETDPGYATRITVALDAMGLLADTGDGVWYASVEDTPSDADT
EEECCCHHCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHEECCCCEEEEECCCCCCCHHH
AARTLAALDGDADDAGTMLIMERMRARMLKAWPGGYPAGEQIGFARQTAGLALTANLALT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEECHHHH
GMRALDMDAHGDREGATGVIRAAMRVWPGLFPDRPDRDALAAWVSDLHGDAVAAMRLLHR
CCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
MGFASDTDMEALR
HCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA