| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692052
Identifier: 213692052
GI number: 213692052
Start: 1354834
End: 1356747
Strand: Direct
Name: 213692052
Synonym: Blon_1170
Alternate gene names: NA
Gene position: 1354834-1356747 (Clockwise)
Preceding gene: 213692051
Following gene: 213692053
Centisome position: 47.83
GC content: 59.87
Gene sequence:
>1914_bases ATGGCAGAGGGCACAAGCGGACGTCGGCGTTTTTCCGACAAATGGGGCAAGCACGAGCTGGACGTACTGGCTGTGTTGTC ATCCGCGTTCCCGCAATGGCTCACATCCCGCCAAATTGCGCAGCGCGTCAAAGCTTACGCCGACTCGTATGGAGAGCTGG CAGATCAGGCCGCCAAGGCCGCGTTCGCCAAGCAGTTCCAGCGTGATCGCGCCAAGCTCGCCGCTATGGGCATCGCCATC GAATCACGGCAGCCTGAGTATTCGTCCAAGTCGGAAGGCCAGGACTTCGCGTCCTACCGTCTGCAGTTGGGCGACGAACC GCGCATCCGTCTGATGTTCGAGCCGGAAGATATGCCGGTGCTTGCCGCCGCCAACTATCTGGCTCGTTCGATGTCGATTT CCTCCGAACCGGATCATTCCCAGCTCACCCAACAGGCGTCGCGCACCACGCCGCGTGTGCCGCAGACCCCTATTCCCGGG CTCGGTTTGGATTCGATTGCGCCTGGCTTGGGCACGCAGCCCATTCCGGACTCGCTGGTCAAGGTTATCGATTCGCGTCG CTTTGCCGCCACCGTTGATGTGGACGGCGAACACCTGAACGTGGCCTACACCGATTCCGACGATTTGGCCATGTTTGTGC TGGAGCATCCGGGTGCCACGATTGTCAGCCCGCAGGAGGCTGTGGACGCCTATCATCGCCGCCTGCACGCCGCCAGCCGA TTCACTCTGGCCGACGAATCCGCCAGCCCTGTAAGCGCCTCGGTGGTTTCCCCATCGATTAGTCGCGATGTTCGTGAGCC GGGTGATCCCGAGTCGATCAAGGCCCAGAACAAGAAGAACGGATCCGCTTTCCAAACGGGCAGCGAGGTGGATCGTCGCC TGCGTCTGATGCTGTTCCTCTCCGCTCACTTGGGTGAGGAATTCTCGATGAGCGAGCTGGCCGAACGGTTCATTGGCAAG CCGAAGAACGAGGACGAGCTCAAGAAGTACGTCAACATCATCCACAAGGACATCAACACCCTTACCACCGTCTCCGATGA CGGCGAGATGGCGGGCAGCCAGTTCTTCGATATCGACTGGCCGCTGCTGGATGCCGAGGGTATTGTTTCCGCCACCAATT CGTTGGGCCTTGAACGTCTTGCCGGCATTTCGCCGCAATACCTCAGCATGCTCACCGCCTCGGTCAGTTACTTGGCGCAT TCGCCGTTACTGCCGGACAAGCAGCGTGGGCAGGCCGAATCCCTGTATGAGCGTTTGCACCGCCATGTCAGCCCGGGCCA GACCCCGTGGCTGAGCCTGACCGGCTATGAGCTGGAGCCCCGAAGCTTCTCCATCGTCAAGCGTGCGATCAACACCGATT CGTTGTTGGACATGGAGTATTCCGATGGTACCGGTAGTACCCGTCGCAAGCTGGTGGCCCCCGCCAAGATCTTCATCGAC GAAGGCGTGTATTATGCCGCCGTCTACACGGATGTCGGTTCCGCCGCCCCCAAGGACAAGAAGGCCTACGTCTCCAAAGA CAAGACCATCGACAAGGCCAACGGCAAGCCGCGCATCTGGCAGGTGCTGCGATTGGCCCGTATCGAAAAGGCGGAATTGG TCAAGCCCACCAAGCAGATCAACATCCCGAACATGCCGGTGAGCGAACTGCGCAAGTGGAGTTTCGACAACGGTACCGAC GCGGTGTTCATCACCGATCAGCGCGATCTGGCATTCATCAAGACATTGCCGGGCGCTACCGTCGAACAATGCGGTGCCGG TGAAAAGGTGCATCTGACCGTTTCCTCCGATTCCTGGTTCGTGGCCTTCTGCATTGCCCACGCGCGTCATATCACAGCGG TCGCCCCGGAAACGTTGCGCACCATGATCGTGGCACGTGCCGAACGCGAACTGAGCATCAGCGAGAACAAGTAA
Upstream 100 bases:
>100_bases GTGAAATGGCGCTCAACTGCGGAAAAAGCCTCTAAGATAGAGTGAGTGTGGGGAAACTCATACGCACTTATAACGAAACA ATAACTATACGTGAGGACTA
Downstream 100 bases:
>100_bases GGAGCCTTTCATGCCTTGGTGGATATGGCTGATTCTGGCCCTGTTCATGCTGGCCATGATTGTTGCCGGACTGATCTATA CAGCCCTTCATGGAATACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MAEGTSGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKAAFAKQFQRDRAKLAAMGIAI ESRQPEYSSKSEGQDFASYRLQLGDEPRIRLMFEPEDMPVLAAANYLARSMSISSEPDHSQLTQQASRTTPRVPQTPIPG LGLDSIAPGLGTQPIPDSLVKVIDSRRFAATVDVDGEHLNVAYTDSDDLAMFVLEHPGATIVSPQEAVDAYHRRLHAASR FTLADESASPVSASVVSPSISRDVREPGDPESIKAQNKKNGSAFQTGSEVDRRLRLMLFLSAHLGEEFSMSELAERFIGK PKNEDELKKYVNIIHKDINTLTTVSDDGEMAGSQFFDIDWPLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAH SPLLPDKQRGQAESLYERLHRHVSPGQTPWLSLTGYELEPRSFSIVKRAINTDSLLDMEYSDGTGSTRRKLVAPAKIFID EGVYYAAVYTDVGSAAPKDKKAYVSKDKTIDKANGKPRIWQVLRLARIEKAELVKPTKQINIPNMPVSELRKWSFDNGTD AVFITDQRDLAFIKTLPGATVEQCGAGEKVHLTVSSDSWFVAFCIAHARHITAVAPETLRTMIVARAERELSISENK
Sequences:
>Translated_637_residues MAEGTSGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKAAFAKQFQRDRAKLAAMGIAI ESRQPEYSSKSEGQDFASYRLQLGDEPRIRLMFEPEDMPVLAAANYLARSMSISSEPDHSQLTQQASRTTPRVPQTPIPG LGLDSIAPGLGTQPIPDSLVKVIDSRRFAATVDVDGEHLNVAYTDSDDLAMFVLEHPGATIVSPQEAVDAYHRRLHAASR FTLADESASPVSASVVSPSISRDVREPGDPESIKAQNKKNGSAFQTGSEVDRRLRLMLFLSAHLGEEFSMSELAERFIGK PKNEDELKKYVNIIHKDINTLTTVSDDGEMAGSQFFDIDWPLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAH SPLLPDKQRGQAESLYERLHRHVSPGQTPWLSLTGYELEPRSFSIVKRAINTDSLLDMEYSDGTGSTRRKLVAPAKIFID EGVYYAAVYTDVGSAAPKDKKAYVSKDKTIDKANGKPRIWQVLRLARIEKAELVKPTKQINIPNMPVSELRKWSFDNGTD AVFITDQRDLAFIKTLPGATVEQCGAGEKVHLTVSSDSWFVAFCIAHARHITAVAPETLRTMIVARAERELSISENK >Mature_636_residues AEGTSGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKAAFAKQFQRDRAKLAAMGIAIE SRQPEYSSKSEGQDFASYRLQLGDEPRIRLMFEPEDMPVLAAANYLARSMSISSEPDHSQLTQQASRTTPRVPQTPIPGL GLDSIAPGLGTQPIPDSLVKVIDSRRFAATVDVDGEHLNVAYTDSDDLAMFVLEHPGATIVSPQEAVDAYHRRLHAASRF TLADESASPVSASVVSPSISRDVREPGDPESIKAQNKKNGSAFQTGSEVDRRLRLMLFLSAHLGEEFSMSELAERFIGKP KNEDELKKYVNIIHKDINTLTTVSDDGEMAGSQFFDIDWPLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAHS PLLPDKQRGQAESLYERLHRHVSPGQTPWLSLTGYELEPRSFSIVKRAINTDSLLDMEYSDGTGSTRRKLVAPAKIFIDE GVYYAAVYTDVGSAAPKDKKAYVSKDKTIDKANGKPRIWQVLRLARIEKAELVKPTKQINIPNMPVSELRKWSFDNGTDA VFITDQRDLAFIKTLPGATVEQCGAGEKVHLTVSSDSWFVAFCIAHARHITAVAPETLRTMIVARAERELSISENK
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70270; Mature: 70139
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGTSGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKA CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAKQFQRDRAKLAAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRIRLMFEPEDMPV HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCH LAAANYLARSMSISSEPDHSQLTQQASRTTPRVPQTPIPGLGLDSIAPGLGTQPIPDSLV HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHH KVIDSRRFAATVDVDGEHLNVAYTDSDDLAMFVLEHPGATIVSPQEAVDAYHRRLHAASR HHHHCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHH FTLADESASPVSASVVSPSISRDVREPGDPESIKAQNKKNGSAFQTGSEVDRRLRLMLFL EEECCCCCCCCCHHHCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH SAHLGEEFSMSELAERFIGKPKNEDELKKYVNIIHKDINTLTTVSDDGEMAGSQFFDIDW HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCC PLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAHSPLLPDKQRGQAESLYERLH CEECCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RHVSPGQTPWLSLTGYELEPRSFSIVKRAINTDSLLDMEYSDGTGSTRRKLVAPAKIFID HHCCCCCCCEEEEECCEECCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHEEEE EGVYYAAVYTDVGSAAPKDKKAYVSKDKTIDKANGKPRIWQVLRLARIEKAELVKPTKQI CCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHC NIPNMPVSELRKWSFDNGTDAVFITDQRDLAFIKTLPGATVEQCGAGEKVHLTVSSDSWF CCCCCCHHHHHHCCCCCCCCEEEEECCCCEEEEHHCCCCHHHHCCCCCEEEEEECCCCEE VAFCIAHARHITAVAPETLRTMIVARAERELSISENK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEGTSGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKA CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAKQFQRDRAKLAAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRIRLMFEPEDMPV HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCH LAAANYLARSMSISSEPDHSQLTQQASRTTPRVPQTPIPGLGLDSIAPGLGTQPIPDSLV HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHH KVIDSRRFAATVDVDGEHLNVAYTDSDDLAMFVLEHPGATIVSPQEAVDAYHRRLHAASR HHHHCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHH FTLADESASPVSASVVSPSISRDVREPGDPESIKAQNKKNGSAFQTGSEVDRRLRLMLFL EEECCCCCCCCCHHHCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH SAHLGEEFSMSELAERFIGKPKNEDELKKYVNIIHKDINTLTTVSDDGEMAGSQFFDIDW HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCC PLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAHSPLLPDKQRGQAESLYERLH CEECCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RHVSPGQTPWLSLTGYELEPRSFSIVKRAINTDSLLDMEYSDGTGSTRRKLVAPAKIFID HHCCCCCCCEEEEECCEECCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHEEEE EGVYYAAVYTDVGSAAPKDKKAYVSKDKTIDKANGKPRIWQVLRLARIEKAELVKPTKQI CCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHC NIPNMPVSELRKWSFDNGTDAVFITDQRDLAFIKTLPGATVEQCGAGEKVHLTVSSDSWF CCCCCCHHHHHHCCCCCCCCEEEEECCCCEEEEHHCCCCHHHHCCCCCEEEEEECCCCEE VAFCIAHARHITAVAPETLRTMIVARAERELSISENK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA