| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692022
Identifier: 213692022
GI number: 213692022
Start: 1322827
End: 1323636
Strand: Reverse
Name: 213692022
Synonym: Blon_1140
Alternate gene names: NA
Gene position: 1323636-1322827 (Counterclockwise)
Preceding gene: 213692023
Following gene: 213692021
Centisome position: 46.73
GC content: 59.14
Gene sequence:
>810_bases ATGAGCGATTCCCTGATTAAGGTCCCGTTCCACGGTGACACCATCGAAGCCGTGGCCAAGGATGGCTCATGGATGGCATC GCTGAGGCGCATGTGCGAAAACCTCGATGTGGACTACTGGACGCAACTTCGCAAGCTGAAAGAGAAGCCGTGGGCAACCG TAGTCATTATGCCTATGGTTGGTGCGGACGGCAAGAACCGTGAGATGGCGATGATTGACCGTCGCACGATGACCATGTGG CTCGCCAACATCAACCCCGGCAAAGTCAAGCCCGAACTACGTTCGAAGATCGAAGCCTACCAGTGCGAAGCCGCCGACGC ATTGGACAAGTACTTCAACGAGGGTGCCGCCATCCGATTCAAAACCAACAGCATGGATGATGAGTCGTTGATTCTGGCGA AGGCGAACCAGATCCAATCCCGCCTGCTCGGCGAAGCCCGCCGGGAGAATCTCGAACTCCGTGCCAGCAACGAGAAAATG AGGCCTCTCGCCCTGTTGGGCGAGGCATTCGTCTCGGCGGACGGGACGATGAGCGTAAGACAGGCCGCACGTCATTTCCA AGCCATCGACAAGCGGATGAACTGCGACACCGTGTACGGGATACTGCGCGGTGCCGGCTATATCGAGCTGCGTTCGAAAG CGCCGACCGTCAAGGCCGTCAAGCCCGGCTATCTGAAACCCGTCATGTCTCGCAAGGCGAACGGGAAGCTTGACCGCCAG TGCGCGCGGTTCACCGCCAAGGGTGTGAACTGGTTCATCGACCGGTTCATCTACGGGCGCAGCCAGGGTCGACTCCCGGG GGTGGCGTGA
Upstream 100 bases:
>100_bases ATGCTGTGACAGACGAGAGCATGACGACGATCATCCCGTTCAACAACGTCGAAAGCATCGAACAGGTGGAGGCCGTGGAT GCGGAGGACGGTGACCTCAA
Downstream 100 bases:
>100_bases TGGCCGGCGCTCTCCTTGAGAAAAAGCTTCGTCTATCTCTTGCCTACCCTATCGTGTCGGACTCTTACAGACATTCCTTC CCCATGGAATTGACCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Ant Protein; Phage-Like Antirepressor
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSDSLIKVPFHGDTIEAVAKDGSWMASLRRMCENLDVDYWTQLRKLKEKPWATVVIMPMVGADGKNREMAMIDRRTMTMW LANINPGKVKPELRSKIEAYQCEAADALDKYFNEGAAIRFKTNSMDDESLILAKANQIQSRLLGEARRENLELRASNEKM RPLALLGEAFVSADGTMSVRQAARHFQAIDKRMNCDTVYGILRGAGYIELRSKAPTVKAVKPGYLKPVMSRKANGKLDRQ CARFTAKGVNWFIDRFIYGRSQGRLPGVA
Sequences:
>Translated_269_residues MSDSLIKVPFHGDTIEAVAKDGSWMASLRRMCENLDVDYWTQLRKLKEKPWATVVIMPMVGADGKNREMAMIDRRTMTMW LANINPGKVKPELRSKIEAYQCEAADALDKYFNEGAAIRFKTNSMDDESLILAKANQIQSRLLGEARRENLELRASNEKM RPLALLGEAFVSADGTMSVRQAARHFQAIDKRMNCDTVYGILRGAGYIELRSKAPTVKAVKPGYLKPVMSRKANGKLDRQ CARFTAKGVNWFIDRFIYGRSQGRLPGVA >Mature_268_residues SDSLIKVPFHGDTIEAVAKDGSWMASLRRMCENLDVDYWTQLRKLKEKPWATVVIMPMVGADGKNREMAMIDRRTMTMWL ANINPGKVKPELRSKIEAYQCEAADALDKYFNEGAAIRFKTNSMDDESLILAKANQIQSRLLGEARRENLELRASNEKMR PLALLGEAFVSADGTMSVRQAARHFQAIDKRMNCDTVYGILRGAGYIELRSKAPTVKAVKPGYLKPVMSRKANGKLDRQC ARFTAKGVNWFIDRFIYGRSQGRLPGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30327; Mature: 30195
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLIKVPFHGDTIEAVAKDGSWMASLRRMCENLDVDYWTQLRKLKEKPWATVVIMPMV CCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEE GADGKNREMAMIDRRTMTMWLANINPGKVKPELRSKIEAYQCEAADALDKYFNEGAAIRF CCCCCCCCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE KTNSMDDESLILAKANQIQSRLLGEARRENLELRASNEKMRPLALLGEAFVSADGTMSVR ECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHH QAARHFQAIDKRMNCDTVYGILRGAGYIELRSKAPTVKAVKPGYLKPVMSRKANGKLDRQ HHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCEECCCCCHHHHHHHCCCCCCHHHH CARFTAKGVNWFIDRFIYGRSQGRLPGVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SDSLIKVPFHGDTIEAVAKDGSWMASLRRMCENLDVDYWTQLRKLKEKPWATVVIMPMV CCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEE GADGKNREMAMIDRRTMTMWLANINPGKVKPELRSKIEAYQCEAADALDKYFNEGAAIRF CCCCCCCCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE KTNSMDDESLILAKANQIQSRLLGEARRENLELRASNEKMRPLALLGEAFVSADGTMSVR ECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHH QAARHFQAIDKRMNCDTVYGILRGAGYIELRSKAPTVKAVKPGYLKPVMSRKANGKLDRQ HHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCEECCCCCHHHHHHHCCCCCCHHHH CARFTAKGVNWFIDRFIYGRSQGRLPGVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA