| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692016
Identifier: 213692016
GI number: 213692016
Start: 1320710
End: 1321039
Strand: Reverse
Name: 213692016
Synonym: Blon_1134
Alternate gene names: NA
Gene position: 1321039-1320710 (Counterclockwise)
Preceding gene: 213692017
Following gene: 213692015
Centisome position: 46.63
GC content: 62.73
Gene sequence:
>330_bases ATGAGCAAGCCGATCAACGAACCCCGTCTGGTGCAGCAGGTGCTGATAGCGGACGAGGATCTGAGTTTCGAACTGGCGGC TTTGGTGCCGCCGGCGAACGGCATCACGAACGCGGCCAGCACGTTCATCGACAAGGCCACCAAGCTGTTGCTGTCCGACA AGATCATGCTCACCAACGAGCAGCATACGGCCATCGCGACGGCCATCGCCGTCGCCCAACTGACCGTCAAGGAAGGCGCG GCCGTGTCGAAGCTGCTGCGCAACCCGGACGCTTCGACGGACATCATCGCCGGACTACGCCTCGCCTCCGAGGACAGGCA TGATGCCTGA
Upstream 100 bases:
>100_bases GCGACCCCTACACCTGTTGCGGGCACGAATACGAGCCGCACCTCTATATCCGTATCAAACCGCTCCCCGAACGGGAGCCG AACAAGCAAGGAGAACAATC
Downstream 100 bases:
>100_bases CCGGCGTCTTTGGATGCCGCGTTGCAGGACATGCGGGCCACTCGGCAAGCCCACCGGACTGGACGAGGCGGTCACCTGCT GCAACCGGCACGCGAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSKPINEPRLVQQVLIADEDLSFELAALVPPANGITNAASTFIDKATKLLLSDKIMLTNEQHTAIATAIAVAQLTVKEGA AVSKLLRNPDASTDIIAGLRLASEDRHDA
Sequences:
>Translated_109_residues MSKPINEPRLVQQVLIADEDLSFELAALVPPANGITNAASTFIDKATKLLLSDKIMLTNEQHTAIATAIAVAQLTVKEGA AVSKLLRNPDASTDIIAGLRLASEDRHDA >Mature_108_residues SKPINEPRLVQQVLIADEDLSFELAALVPPANGITNAASTFIDKATKLLLSDKIMLTNEQHTAIATAIAVAQLTVKEGAA VSKLLRNPDASTDIIAGLRLASEDRHDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11573; Mature: 11442
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPINEPRLVQQVLIADEDLSFELAALVPPANGITNAASTFIDKATKLLLSDKIMLTNE CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC QHTAIATAIAVAQLTVKEGAAVSKLLRNPDASTDIIAGLRLASEDRHDA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKPINEPRLVQQVLIADEDLSFELAALVPPANGITNAASTFIDKATKLLLSDKIMLTNE CCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC QHTAIATAIAVAQLTVKEGAAVSKLLRNPDASTDIIAGLRLASEDRHDA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA