| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692006
Identifier: 213692006
GI number: 213692006
Start: 1313390
End: 1313902
Strand: Reverse
Name: 213692006
Synonym: Blon_1124
Alternate gene names: NA
Gene position: 1313902-1313390 (Counterclockwise)
Preceding gene: 213692007
Following gene: 213692005
Centisome position: 46.38
GC content: 61.4
Gene sequence:
>513_bases ATGAGCGACGGCAAGCGGAGGGCCCGTGAACGCAAACCAGCATGGCTTCGCGCGTTCATCCCGAAATCCAGCCCGCTCGT GGTCACGGTCTGCGAGGGGTGTGGCCTGTATGTGATTCAGGACAGGGAGAGCGTGTGGGAGTCGTGGGACTGCGGACTTG TGGAGGGTGATGACCTGACGGTGGCGATAATCCTCGGCCGGCCGTTGACGCGGGTTGTCTGGCTGCCATCAGTCGGCTAT CCGTTGCTGCGCAGCGTGAGCGGGAGTGCGGGCATCAGGCCTGACGGCCAATACCTCGCTGGTCACATGTGCCGCTTGGC AAGAGTGAGCGTCAAGCCGTTCAAGCCGCCGAAAAGAGACCGTCCGCCGGGCAAGCCGTGGGGCGGACGCAACCTCACGA AAAGGGAGCTCGATGAATTCAAACGCATCTGGGACATGCCGTATTCGCGGCTCAAATATGAGAAAGCCCCAACCGTGGTC GGCCAGGGCGATGAGAAGCAAGCATTATTCTAG
Upstream 100 bases:
>100_bases CCGGTGACGTCAAACGTCTATGCGTCGAAGCTTGCACCGGCGAGCACATCGAAGCCATGAGCTTCGAGCTTATCGACCAG CAATCAGGAGGCGTCATGCG
Downstream 100 bases:
>100_bases CCGACCAGCCGGAAGGGGCTTAGCATGAACTGCCAGAACTGCAAGACGATAACCGAAGAGGGGTATTCACTGTGCGCAGC ATGCGAGATGCGTTTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSDGKRRARERKPAWLRAFIPKSSPLVVTVCEGCGLYVIQDRESVWESWDCGLVEGDDLTVAIILGRPLTRVVWLPSVGY PLLRSVSGSAGIRPDGQYLAGHMCRLARVSVKPFKPPKRDRPPGKPWGGRNLTKRELDEFKRIWDMPYSRLKYEKAPTVV GQGDEKQALF
Sequences:
>Translated_170_residues MSDGKRRARERKPAWLRAFIPKSSPLVVTVCEGCGLYVIQDRESVWESWDCGLVEGDDLTVAIILGRPLTRVVWLPSVGY PLLRSVSGSAGIRPDGQYLAGHMCRLARVSVKPFKPPKRDRPPGKPWGGRNLTKRELDEFKRIWDMPYSRLKYEKAPTVV GQGDEKQALF >Mature_169_residues SDGKRRARERKPAWLRAFIPKSSPLVVTVCEGCGLYVIQDRESVWESWDCGLVEGDDLTVAIILGRPLTRVVWLPSVGYP LLRSVSGSAGIRPDGQYLAGHMCRLARVSVKPFKPPKRDRPPGKPWGGRNLTKRELDEFKRIWDMPYSRLKYEKAPTVVG QGDEKQALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19222; Mature: 19090
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGKRRARERKPAWLRAFIPKSSPLVVTVCEGCGLYVIQDRESVWESWDCGLVEGDDLT CCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCEEEECCCHHHHHCCCCCEEECCCEE VAIILGRPLTRVVWLPSVGYPLLRSVSGSAGIRPDGQYLAGHMCRLARVSVKPFKPPKRD EEEEECCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC RPPGKPWGGRNLTKRELDEFKRIWDMPYSRLKYEKAPTVVGQGDEKQALF CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure SDGKRRARERKPAWLRAFIPKSSPLVVTVCEGCGLYVIQDRESVWESWDCGLVEGDDLT CCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCEEEECCCHHHHHCCCCCEEECCCEE VAIILGRPLTRVVWLPSVGYPLLRSVSGSAGIRPDGQYLAGHMCRLARVSVKPFKPPKRD EEEEECCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC RPPGKPWGGRNLTKRELDEFKRIWDMPYSRLKYEKAPTVVGQGDEKQALF CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA