Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691997

Identifier: 213691997

GI number: 213691997

Start: 1304837

End: 1305256

Strand: Reverse

Name: 213691997

Synonym: Blon_1115

Alternate gene names: NA

Gene position: 1305256-1304837 (Counterclockwise)

Preceding gene: 213691998

Following gene: 213691996

Centisome position: 46.08

GC content: 61.43

Gene sequence:

>420_bases
ATGGTCACATCGGTGCAGGATGTCGCCGCCCAACTGGGGCGGCCTATCACCGACGAGCTTGAGGTCAAGCAGATCGAGGC
ATGGATAGCGGGCGCGGAAATCGTCATCCGCAAACGCTATCCGAACCTCGACCAGCTCATAGCCGACGTGCGTATCGACC
AGAAAACCGTGGACTATGTGGAGGCCATCGCCGTTGCGCGCTATGCGCGCAACCCCGAGGGTGCCACATCCTCGAGTTCG
ATGATCGACGACTATCAGCAGTCGTTCGGCACGAGGAACGCGGTGGCGACCATCGGTCTGCTGGATGACGAGTGGGCGCT
GCTCGCCCCCTCTGATTCTGGTTCGACAGGCGCGTTCACCATCACGCCAACCGGTTGGAGGGATGATGCCCGACCTGGCT
CATGTTTTGGCGGCTGGTAG

Upstream 100 bases:

>100_bases
CGTCCAGGTGACCCTCGCGGCGGACGCCGGCGCTACGGCCATCGTGACCGCGCTCAAAGCCGCCGGCATCGCCAAGTAAC
CGAGTCAGGAGGGCCGCGAT

Downstream 100 bases:

>100_bases
ACGCCGGGCCGAAAGCCTCATGCTCGACCGGTGCCGTGTCGCCCACAAAGGCGGCACGGTCACCGATCCGGTGACCGGCG
TTCCGGCTCCGACGGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVTSVQDVAAQLGRPITDELEVKQIEAWIAGAEIVIRKRYPNLDQLIADVRIDQKTVDYVEAIAVARYARNPEGATSSSS
MIDDYQQSFGTRNAVATIGLLDDEWALLAPSDSGSTGAFTITPTGWRDDARPGSCFGGW

Sequences:

>Translated_139_residues
MVTSVQDVAAQLGRPITDELEVKQIEAWIAGAEIVIRKRYPNLDQLIADVRIDQKTVDYVEAIAVARYARNPEGATSSSS
MIDDYQQSFGTRNAVATIGLLDDEWALLAPSDSGSTGAFTITPTGWRDDARPGSCFGGW
>Mature_139_residues
MVTSVQDVAAQLGRPITDELEVKQIEAWIAGAEIVIRKRYPNLDQLIADVRIDQKTVDYVEAIAVARYARNPEGATSSSS
MIDDYQQSFGTRNAVATIGLLDDEWALLAPSDSGSTGAFTITPTGWRDDARPGSCFGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15094; Mature: 15094

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSVQDVAAQLGRPITDELEVKQIEAWIAGAEIVIRKRYPNLDQLIADVRIDQKTVDYV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHH
EAIAVARYARNPEGATSSSSMIDDYQQSFGTRNAVATIGLLDDEWALLAPSDSGSTGAFT
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCEEE
ITPTGWRDDARPGSCFGGW
ECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTSVQDVAAQLGRPITDELEVKQIEAWIAGAEIVIRKRYPNLDQLIADVRIDQKTVDYV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHH
EAIAVARYARNPEGATSSSSMIDDYQQSFGTRNAVATIGLLDDEWALLAPSDSGSTGAFT
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCEEE
ITPTGWRDDARPGSCFGGW
ECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA